Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1340899 |
| length | 331 |
| lncRNA type | intronic |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G1175860 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 41940780 ~ 41941110 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1340895 | lncRNA | downstream | 8432 | 41932075 ~ 41932348 (-) | True | G1175856 |
| TU1340892 | lncRNA | downstream | 12114 | 41928399 ~ 41928666 (-) | True | G1175853 |
| TU1340891 | lncRNA | downstream | 12766 | 41927796 ~ 41928014 (-) | True | G1175852 |
| TU1340885 | lncRNA | downstream | 18537 | 41922044 ~ 41922243 (-) | True | G1175846 |
| TU1340881 | lncRNA | downstream | 21959 | 41918583 ~ 41918821 (-) | True | G1175842 |
| TU1340900 | lncRNA | upstream | 296 | 41941406 ~ 41941665 (-) | True | G1175861 |
| TU1340901 | lncRNA | upstream | 1499 | 41942609 ~ 41942905 (-) | True | G1175862 |
| TU1340902 | lncRNA | upstream | 2358 | 41943468 ~ 41943688 (-) | True | G1175863 |
| TU1340907 | lncRNA | upstream | 8439 | 41949549 ~ 41949779 (-) | True | G1175868 |
| TU1340911 | lncRNA | upstream | 11436 | 41952546 ~ 41952751 (-) | True | G1175872 |
| XM_021559455.2 | mRNA | downstream | 76971 | 41862761 ~ 41863809 (-) | True | LOC110487541 |
| XM_036941126.1 | mRNA | downstream | 83154 | 41778349 ~ 41857626 (-) | False | LOC110486396 |
| XM_036941125.1 | mRNA | downstream | 93121 | 41778349 ~ 41847659 (-) | False | LOC110486396 |
| XM_021557957.2 | mRNA | downstream | 93122 | 41778349 ~ 41847658 (-) | False | LOC110486396 |
| NM_001160565.2 | mRNA | downstream | 207791 | 41730039 ~ 41732989 (-) | True | rl23 |
| XM_021557963.2 | mRNA | upstream | 66536 | 42007646 ~ 42015904 (-) | False | LOC110486400 |
| XM_021557965.2 | mRNA | upstream | 67504 | 42008614 ~ 42015906 (-) | True | LOC110486400 |
| XM_021557985.2 | mRNA | upstream | 269112 | 42210222 ~ 42291977 (-) | False | LOC110486406 |
| XM_021557986.2 | mRNA | upstream | 269112 | 42210222 ~ 42291977 (-) | True | LOC110486406 |
| XR_005035740.1 | mRNA | upstream | 409418 | 42350528 ~ 42357245 (-) | True | LOC118938459 |
| TU1340025 | other | downstream | 648986 | 41290349 ~ 41291794 (-) | True | col5a3a |
| TU1340027 | other | downstream | 650991 | 41284782 ~ 41289789 (-) | False | col5a3a |
| TU1339785 | other | downstream | 1106144 | 40833903 ~ 40834636 (-) | True | LOC110486364 |
| TU1339628 | other | downstream | 1483099 | 40456895 ~ 40457681 (-) | True | G1174741 |
| TU1339538 | other | downstream | 1623921 | 40316118 ~ 40316859 (-) | True | G1174658 |
| TU1340945 | other | upstream | 56204 | 41997314 ~ 41997637 (-) | True | G1175904 |
| TU1340947 | other | upstream | 58242 | 41999352 ~ 42000091 (-) | True | G1175906 |
| TU1341227 | other | upstream | 386934 | 42328044 ~ 42328572 (-) | True | G1176164 |
| TU1341849 | other | upstream | 512049 | 42453159 ~ 42456946 (-) | True | LOC110486413 |
| TU1341929 | other | upstream | 528592 | 42469702 ~ 42471978 (-) | True | LOC110487542 |
