Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1341521 |
| length | 226 |
| lncRNA type | inter_gene |
| GC content | 0.34 |
| exon number | 2 |
| gene id | G1176408 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 42856718 ~ 42857103 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1341508 | lncRNA | upstream | 24966 | 42828436 ~ 42831752 (+) | True | G1176398 |
| TU1341491 | lncRNA | upstream | 95389 | 42760920 ~ 42761329 (+) | True | G1176382 |
| TU1341490 | lncRNA | upstream | 96414 | 42760005 ~ 42760304 (+) | True | G1176381 |
| TU1341489 | lncRNA | upstream | 98107 | 42758286 ~ 42758611 (+) | True | G1176380 |
| TU1341480 | lncRNA | upstream | 121520 | 42734999 ~ 42735198 (+) | True | G1176371 |
| TU1341523 | lncRNA | downstream | 13278 | 42870381 ~ 42870601 (+) | True | G1176410 |
| TU1341525 | lncRNA | downstream | 17082 | 42874185 ~ 42874468 (+) | True | G1176412 |
| TU1341581 | lncRNA | downstream | 94016 | 42951119 ~ 42953292 (+) | True | nol12 |
| TU1341592 | lncRNA | downstream | 104385 | 42961488 ~ 42961727 (+) | True | G1176458 |
| TU1341593 | lncRNA | downstream | 107230 | 42964333 ~ 42964538 (+) | True | G1176459 |
| XM_021558039.2 | mRNA | upstream | 59356 | 42794608 ~ 42797362 (+) | True | LOC110486436 |
| XM_021558033.2 | mRNA | upstream | 62547 | 42787639 ~ 42794171 (+) | False | LOC110486433 |
| XM_021558034.2 | mRNA | upstream | 62547 | 42787639 ~ 42794171 (+) | True | LOC110486433 |
| XM_021558038.2 | mRNA | upstream | 75476 | 42762420 ~ 42781242 (+) | True | LOC110486435 |
| XM_021558032.2 | mRNA | upstream | 107161 | 42735320 ~ 42749557 (+) | True | LOC110486431 |
| XM_021558046.2 | mRNA | downstream | 5007 | 42862110 ~ 42866316 (+) | False | LOC110486440 |
| XR_005035737.1 | mRNA | downstream | 5007 | 42862110 ~ 42866316 (+) | True | LOC110486440 |
| XM_036942435.1 | mRNA | downstream | 24853 | 42881956 ~ 42911219 (+) | False | LOC110485180 |
| XM_036942436.1 | mRNA | downstream | 24853 | 42881956 ~ 42911227 (+) | True | LOC110485180 |
| XM_021558049.2 | mRNA | downstream | 54813 | 42911916 ~ 42921879 (+) | False | LOC110486443 |
| TU1341428 | other | upstream | 126607 | 42726002 ~ 42730111 (+) | True | LOC110486430 |
| TU1341375 | other | upstream | 372198 | 42482377 ~ 42484520 (+) | True | G1176278 |
| TU1341137 | other | upstream | 564852 | 42289091 ~ 42291866 (+) | True | G1176084 |
| TU1340698 | other | upstream | 930062 | 41926275 ~ 41926656 (+) | True | G1175667 |
| TU1340321 | other | upstream | 997375 | 41857189 ~ 41859343 (+) | True | G1175346 |
| TU1341549 | other | downstream | 108390 | 42965493 ~ 42972211 (+) | True | LOC110486447 |
| TU1341730 | other | downstream | 402072 | 43259175 ~ 43265156 (+) | False | LOC110485182 |
| TU1341800 | other | downstream | 540646 | 43397749 ~ 43402280 (+) | False | LOC110486464 |
| TU1341801 | other | downstream | 540646 | 43397749 ~ 43402280 (+) | True | LOC110486464 |
| TU1341841 | other | downstream | 549065 | 43406168 ~ 43407942 (+) | True | LOC110486465 |
