Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1342268 |
| length | 381 |
| lncRNA type | inter_gene |
| GC content | 0.63 |
| exon number | 1 |
| gene id | G1177040 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 43051491 ~ 43051871 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1342267 | lncRNA | downstream | 889 | 43050396 ~ 43050602 (-) | True | G1177039 |
| TU1342204 | lncRNA | downstream | 30518 | 43019077 ~ 43020973 (-) | True | LOC110486451 |
| TU1342261 | lncRNA | downstream | 33148 | 43018091 ~ 43018343 (-) | True | G1177033 |
| TU1342256 | lncRNA | downstream | 42118 | 43009040 ~ 43009373 (-) | True | G1177029 |
| TU1342255 | lncRNA | downstream | 43422 | 43007790 ~ 43008069 (-) | True | G1177028 |
| TU1342270 | lncRNA | upstream | 2377 | 43054248 ~ 43054452 (-) | False | LOC118938293 |
| TU1342271 | lncRNA | upstream | 2744 | 43054615 ~ 43054917 (-) | False | LOC118938293 |
| TU1342274 | lncRNA | upstream | 5908 | 43057779 ~ 43064606 (-) | True | LOC118938293 |
| TU1342286 | lncRNA | upstream | 17211 | 43069082 ~ 43069560 (-) | True | G1177056 |
| TU1342295 | lncRNA | upstream | 26011 | 43077882 ~ 43079581 (-) | True | G1177063 |
| XM_021558074.2 | mRNA | downstream | 1742 | 43039494 ~ 43049749 (-) | True | fmc1 |
| XM_021558073.2 | mRNA | downstream | 12282 | 43032510 ~ 43039209 (-) | True | LOC110486454 |
| XM_021558069.2 | mRNA | downstream | 25782 | 43020947 ~ 43025709 (-) | False | LOC110486451 |
| XR_005035772.1 | mRNA | downstream | 39837 | 43011500 ~ 43011654 (-) | True | LOC118938563 |
| XM_021558058.2 | mRNA | downstream | 48338 | 42993642 ~ 43003153 (-) | True | fam234b |
| XR_005035547.1 | mRNA | upstream | 1798 | 43053669 ~ 43064650 (-) | False | LOC118938293 |
| XR_005035549.1 | mRNA | upstream | 1798 | 43053669 ~ 43065646 (-) | False | LOC118938293 |
| XR_005035548.1 | mRNA | upstream | 1798 | 43053669 ~ 43065887 (-) | False | LOC118938293 |
| XM_036941143.1 | mRNA | upstream | 213908 | 43265779 ~ 43271667 (-) | False | LOC110486458 |
| XM_036941144.1 | mRNA | upstream | 213908 | 43265779 ~ 43272054 (-) | True | LOC110486458 |
| TU1342190 | other | downstream | 1947 | 43039174 ~ 43049544 (-) | False | G1176972 |
| TU1342192 | other | downstream | 1947 | 43039240 ~ 43049544 (-) | False | G1176972 |
| TU1342194 | other | downstream | 1947 | 43039573 ~ 43049544 (-) | False | G1176972 |
| TU1342193 | other | downstream | 1947 | 43039740 ~ 43049544 (-) | True | G1176972 |
| TU1342254 | other | downstream | 43733 | 43007379 ~ 43007758 (-) | True | G1177027 |
| TU1342276 | other | upstream | 7559 | 43059430 ~ 43076353 (-) | True | G1177047 |
| TU1342419 | other | upstream | 300630 | 43352501 ~ 43362268 (-) | False | G1177175 |
| TU1342420 | other | upstream | 303848 | 43355719 ~ 43362268 (-) | False | G1177175 |
| TU1342421 | other | upstream | 303848 | 43355719 ~ 43362354 (-) | True | G1177175 |
| TU1342499 | other | upstream | 362288 | 43414159 ~ 43415103 (-) | True | G1177238 |
