Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1342394 |
| length | 306 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G1177151 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 43255408 ~ 43255713 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1342357 | lncRNA | downstream | 36041 | 43213117 ~ 43219367 (-) | True | G1177120 |
| TU1342308 | lncRNA | downstream | 161519 | 43093682 ~ 43093889 (-) | True | G1177076 |
| TU1342303 | lncRNA | downstream | 167320 | 43087788 ~ 43088088 (-) | True | G1177071 |
| TU1342300 | lncRNA | downstream | 170023 | 43085152 ~ 43085385 (-) | True | G1177068 |
| TU1342296 | lncRNA | downstream | 174871 | 43080179 ~ 43080537 (-) | True | G1177064 |
| TU1342405 | lncRNA | upstream | 17995 | 43273708 ~ 43273946 (-) | True | G1177161 |
| TU1342406 | lncRNA | upstream | 18291 | 43274004 ~ 43274241 (-) | True | G1177162 |
| TU1342414 | lncRNA | upstream | 24726 | 43280439 ~ 43280640 (-) | True | G1177170 |
| TU1342422 | lncRNA | upstream | 98587 | 43354300 ~ 43362268 (-) | False | G1177175 |
| TU1342498 | lncRNA | upstream | 152285 | 43407998 ~ 43408371 (-) | True | G1177237 |
| XR_005035548.1 | mRNA | downstream | 189521 | 43053669 ~ 43065887 (-) | False | LOC118938293 |
| XR_005035549.1 | mRNA | downstream | 189762 | 43053669 ~ 43065646 (-) | False | LOC118938293 |
| XR_005035547.1 | mRNA | downstream | 190758 | 43053669 ~ 43064650 (-) | False | LOC118938293 |
| XM_021558074.2 | mRNA | downstream | 205659 | 43039494 ~ 43049749 (-) | True | fmc1 |
| XM_021558073.2 | mRNA | downstream | 216199 | 43032510 ~ 43039209 (-) | True | LOC110486454 |
| XM_036941143.1 | mRNA | upstream | 10066 | 43265779 ~ 43271667 (-) | False | LOC110486458 |
| XM_036941144.1 | mRNA | upstream | 10066 | 43265779 ~ 43272054 (-) | True | LOC110486458 |
| XM_021558082.2 | mRNA | upstream | 30043 | 43285756 ~ 43297849 (-) | True | LOC110486460 |
| XM_021558087.2 | mRNA | upstream | 91065 | 43346778 ~ 43353148 (-) | True | LOC110486463 |
| XM_021559457.2 | mRNA | upstream | 100016 | 43355729 ~ 43362239 (-) | True | LOC110487544 |
| TU1342276 | other | downstream | 179055 | 43059430 ~ 43076353 (-) | True | G1177047 |
| TU1342190 | other | downstream | 205864 | 43039174 ~ 43049544 (-) | False | G1176972 |
| TU1342419 | other | upstream | 96788 | 43352501 ~ 43362268 (-) | False | G1177175 |
| TU1342420 | other | upstream | 100006 | 43355719 ~ 43362268 (-) | False | G1177175 |
| TU1342421 | other | upstream | 100006 | 43355719 ~ 43362354 (-) | True | G1177175 |
| TU1342499 | other | upstream | 158446 | 43414159 ~ 43415103 (-) | True | G1177238 |
| TU1342871 | other | upstream | 345650 | 43601363 ~ 43616008 (-) | False | G1177552 |
