Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1342405 |
| length | 239 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G1177161 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 43273708 ~ 43273946 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1342394 | lncRNA | downstream | 17995 | 43255408 ~ 43255713 (-) | True | G1177151 |
| TU1342357 | lncRNA | downstream | 54341 | 43213117 ~ 43219367 (-) | True | G1177120 |
| TU1342308 | lncRNA | downstream | 179819 | 43093682 ~ 43093889 (-) | True | G1177076 |
| TU1342303 | lncRNA | downstream | 185620 | 43087788 ~ 43088088 (-) | True | G1177071 |
| TU1342300 | lncRNA | downstream | 188323 | 43085152 ~ 43085385 (-) | True | G1177068 |
| TU1342406 | lncRNA | upstream | 58 | 43274004 ~ 43274241 (-) | True | G1177162 |
| TU1342414 | lncRNA | upstream | 6493 | 43280439 ~ 43280640 (-) | True | G1177170 |
| TU1342422 | lncRNA | upstream | 80354 | 43354300 ~ 43362268 (-) | False | G1177175 |
| TU1342498 | lncRNA | upstream | 134052 | 43407998 ~ 43408371 (-) | True | G1177237 |
| TU1342808 | lncRNA | upstream | 197460 | 43471406 ~ 43472241 (-) | True | G1177507 |
| XM_036941144.1 | mRNA | downstream | 1654 | 43265779 ~ 43272054 (-) | True | LOC110486458 |
| XM_036941143.1 | mRNA | downstream | 2041 | 43265779 ~ 43271667 (-) | False | LOC110486458 |
| XR_005035548.1 | mRNA | downstream | 207821 | 43053669 ~ 43065887 (-) | False | LOC118938293 |
| XR_005035549.1 | mRNA | downstream | 208062 | 43053669 ~ 43065646 (-) | False | LOC118938293 |
| XR_005035547.1 | mRNA | downstream | 209058 | 43053669 ~ 43064650 (-) | False | LOC118938293 |
| XM_021558082.2 | mRNA | upstream | 11810 | 43285756 ~ 43297849 (-) | True | LOC110486460 |
| XM_021558087.2 | mRNA | upstream | 72832 | 43346778 ~ 43353148 (-) | True | LOC110486463 |
| XM_021559457.2 | mRNA | upstream | 81783 | 43355729 ~ 43362239 (-) | True | LOC110487544 |
| XM_036941165.1 | mRNA | upstream | 211736 | 43485682 ~ 43487100 (-) | True | LOC118938297 |
| XR_005035555.1 | mRNA | upstream | 213156 | 43487102 ~ 43489593 (-) | True | LOC118938302 |
| TU1342276 | other | downstream | 197355 | 43059430 ~ 43076353 (-) | True | G1177047 |
| TU1342190 | other | downstream | 224164 | 43039174 ~ 43049544 (-) | False | G1176972 |
| TU1342419 | other | upstream | 78555 | 43352501 ~ 43362268 (-) | False | G1177175 |
| TU1342420 | other | upstream | 81773 | 43355719 ~ 43362268 (-) | False | G1177175 |
| TU1342421 | other | upstream | 81773 | 43355719 ~ 43362354 (-) | True | G1177175 |
| TU1342499 | other | upstream | 140213 | 43414159 ~ 43415103 (-) | True | G1177238 |
| TU1342871 | other | upstream | 327417 | 43601363 ~ 43616008 (-) | False | G1177552 |
