Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1343621 |
| length | 675 |
| lncRNA type | antisense_over |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G1178169 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 44476112 ~ 44476786 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1343620 | lncRNA | upstream | 271 | 44475548 ~ 44475841 (+) | True | G1178168 |
| TU1343615 | lncRNA | upstream | 1254 | 44474582 ~ 44474858 (+) | True | G1178167 |
| TU1343612 | lncRNA | upstream | 3610 | 44472289 ~ 44472502 (+) | True | G1178166 |
| TU1343611 | lncRNA | upstream | 4628 | 44471199 ~ 44471484 (+) | True | G1178165 |
| TU1343610 | lncRNA | upstream | 5501 | 44467272 ~ 44470611 (+) | True | G1178164 |
| TU1343622 | lncRNA | downstream | 2592 | 44479378 ~ 44479580 (+) | True | G1178170 |
| TU1343584 | lncRNA | downstream | 2941 | 44479727 ~ 44480100 (+) | True | G1178139 |
| TU1343626 | lncRNA | downstream | 3511 | 44480297 ~ 44480701 (+) | True | G1178172 |
| TU1343807 | lncRNA | downstream | 76374 | 44553160 ~ 44553402 (+) | True | G1178316 |
| TU1343838 | lncRNA | downstream | 135380 | 44612166 ~ 44612256 (+) | True | G1178343 |
| XM_036941206.1 | mRNA | upstream | 123603 | 44344598 ~ 44352509 (+) | False | LOC110486498 |
| XR_005035562.1 | mRNA | upstream | 123603 | 44345870 ~ 44352509 (+) | True | LOC110486498 |
| XR_005035561.1 | mRNA | upstream | 162320 | 44313066 ~ 44313792 (+) | True | LOC118938310 |
| XM_021558123.2 | mRNA | upstream | 216107 | 44249312 ~ 44260005 (+) | False | LOC110486495 |
| XM_021556165.2 | mRNA | downstream | 17532 | 44494318 ~ 44496464 (+) | False | tppc5 |
| XM_021556164.2 | mRNA | downstream | 17560 | 44494346 ~ 44496464 (+) | False | tppc5 |
| NM_001165168.2 | mRNA | downstream | 17597 | 44494383 ~ 44496714 (+) | False | tppc5 |
| XM_021556166.2 | mRNA | downstream | 17967 | 44494753 ~ 44496464 (+) | True | tppc5 |
| XM_021558140.2 | mRNA | downstream | 20180 | 44496966 ~ 44510125 (+) | False | LOC110486502 |
| TU1343210 | other | upstream | 270542 | 44174384 ~ 44205570 (+) | False | LOC110486491 |
| TU1343143 | other | upstream | 354190 | 44118878 ~ 44121922 (+) | True | G1177750 |
| TU1341841 | other | upstream | 1068170 | 43406168 ~ 43407942 (+) | True | LOC110486465 |
| TU1341800 | other | upstream | 1073832 | 43397749 ~ 43402280 (+) | False | LOC110486464 |
| TU1343861 | other | downstream | 191282 | 44668068 ~ 44668459 (+) | True | G1178363 |
| TU1343925 | other | downstream | 383083 | 44859869 ~ 44864183 (+) | True | G1178425 |
| TU1343969 | other | downstream | 443577 | 44920363 ~ 44926317 (+) | True | LOC110485188 |
| TU1343973 | other | downstream | 490582 | 44967368 ~ 44969719 (+) | True | LOC110486526 |
| TU1344763 | other | downstream | 835544 | 45312330 ~ 45313033 (+) | True | G1179156 |
