Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1344785 |
| length | 448 |
| lncRNA type | inter_gene |
| GC content | 0.58 |
| exon number | 1 |
| gene id | G1179178 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 45352458 ~ 45352905 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1344758 | lncRNA | upstream | 9381 | 45300753 ~ 45343077 (+) | True | G1179151 |
| TU1344735 | lncRNA | upstream | 76820 | 45275408 ~ 45275638 (+) | True | G1179130 |
| TU1344173 | lncRNA | upstream | 84498 | 45267330 ~ 45267960 (+) | True | LOC110486541 |
| TU1344176 | lncRNA | upstream | 85249 | 45266472 ~ 45267209 (+) | False | LOC110486541 |
| TU1344191 | lncRNA | upstream | 151388 | 45200225 ~ 45201070 (+) | True | G1178658 |
| TU1344878 | lncRNA | downstream | 65095 | 45418000 ~ 45426391 (+) | True | G1179259 |
| TU1344825 | lncRNA | downstream | 101054 | 45453959 ~ 45455862 (+) | False | G1179214 |
| TU1344826 | lncRNA | downstream | 101054 | 45453959 ~ 45455862 (+) | False | G1179214 |
| TU1344827 | lncRNA | downstream | 101054 | 45453959 ~ 45455862 (+) | True | G1179214 |
| TU1344985 | lncRNA | downstream | 103629 | 45456534 ~ 45456776 (+) | True | G1179350 |
| XM_021558229.2 | mRNA | upstream | 84038 | 45223469 ~ 45268420 (+) | False | LOC110486541 |
| XM_021558228.2 | mRNA | upstream | 84038 | 45223471 ~ 45268420 (+) | False | LOC110486541 |
| XM_021558210.2 | mRNA | upstream | 197726 | 45152082 ~ 45154732 (+) | True | hmox1a |
| XR_002468078.2 | mRNA | upstream | 211518 | 45135680 ~ 45140940 (+) | True | LOC110486534 |
| XM_021559463.2 | mRNA | upstream | 237311 | 45111643 ~ 45115147 (+) | True | zgc:162612 |
| XM_036941255.1 | mRNA | downstream | 5834 | 45358739 ~ 45451742 (+) | True | usp43b |
| XM_021558235.2 | mRNA | downstream | 131893 | 45484798 ~ 45524322 (+) | False | LOC110486545 |
| XM_021558236.2 | mRNA | downstream | 152013 | 45504918 ~ 45524322 (+) | True | LOC110486545 |
| trnas-aga-61 | mRNA | downstream | 173900 | 45526805 ~ 45526886 (+) | True | trnas-aga-61 |
| XR_005035567.1 | mRNA | downstream | 176493 | 45529398 ~ 45553552 (+) | False | LOC110485192 |
| TU1344763 | other | upstream | 39425 | 45312330 ~ 45313033 (+) | True | G1179156 |
| TU1343973 | other | upstream | 382739 | 44967368 ~ 44969719 (+) | True | LOC110486526 |
| TU1343969 | other | upstream | 426141 | 44920363 ~ 44926317 (+) | True | LOC110485188 |
| TU1343925 | other | upstream | 488275 | 44859869 ~ 44864183 (+) | True | G1178425 |
| TU1343861 | other | upstream | 683999 | 44668068 ~ 44668459 (+) | True | G1178363 |
| TU1344997 | other | downstream | 109683 | 45462588 ~ 45462943 (+) | True | G1179362 |
| TU1345036 | other | downstream | 176531 | 45529436 ~ 45530128 (+) | True | LOC110485192 |
| TU1345697 | other | downstream | 821123 | 46174028 ~ 46176562 (+) | False | LOC118936304 |
| TU1345699 | other | downstream | 821577 | 46174482 ~ 46176562 (+) | True | LOC118936304 |
| TU1345745 | other | downstream | 886239 | 46239144 ~ 46273601 (+) | True | G1180047 |
