Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1345004 |
| length | 231 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G1179369 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 45471185 ~ 45471415 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1344995 | lncRNA | upstream | 8880 | 45462053 ~ 45462305 (+) | True | G1179360 |
| TU1344994 | lncRNA | upstream | 9484 | 45461502 ~ 45461701 (+) | True | G1179359 |
| TU1344987 | lncRNA | upstream | 13370 | 45457607 ~ 45457815 (+) | True | G1179352 |
| TU1344985 | lncRNA | upstream | 14409 | 45456534 ~ 45456776 (+) | True | G1179350 |
| TU1344826 | lncRNA | upstream | 15323 | 45453959 ~ 45455862 (+) | False | G1179214 |
| TU1345041 | lncRNA | downstream | 61303 | 45532718 ~ 45532950 (+) | True | G1179402 |
| TU1345089 | lncRNA | downstream | 182352 | 45653767 ~ 45654496 (+) | True | G1179446 |
| TU1345088 | lncRNA | downstream | 183612 | 45655027 ~ 45656039 (+) | True | G1179445 |
| TU1345091 | lncRNA | downstream | 191447 | 45662862 ~ 45663122 (+) | True | G1179448 |
| TU1345095 | lncRNA | downstream | 198145 | 45669560 ~ 45669987 (+) | True | G1179452 |
| XM_036941255.1 | mRNA | upstream | 19443 | 45358739 ~ 45451742 (+) | True | usp43b |
| XM_021558229.2 | mRNA | upstream | 202765 | 45223469 ~ 45268420 (+) | False | LOC110486541 |
| XM_021558228.2 | mRNA | upstream | 202765 | 45223471 ~ 45268420 (+) | False | LOC110486541 |
| XM_021558210.2 | mRNA | upstream | 316453 | 45152082 ~ 45154732 (+) | True | hmox1a |
| XR_002468078.2 | mRNA | upstream | 330245 | 45135680 ~ 45140940 (+) | True | LOC110486534 |
| XM_021558235.2 | mRNA | downstream | 13383 | 45484798 ~ 45524322 (+) | False | LOC110486545 |
| XM_021558236.2 | mRNA | downstream | 33503 | 45504918 ~ 45524322 (+) | True | LOC110486545 |
| trnas-aga-61 | mRNA | downstream | 55390 | 45526805 ~ 45526886 (+) | True | trnas-aga-61 |
| XR_005035567.1 | mRNA | downstream | 57983 | 45529398 ~ 45553552 (+) | False | LOC110485192 |
| XM_036941256.1 | mRNA | downstream | 57983 | 45529398 ~ 45554103 (+) | False | LOC110485192 |
| TU1344997 | other | upstream | 8242 | 45462588 ~ 45462943 (+) | True | G1179362 |
| TU1344763 | other | upstream | 158152 | 45312330 ~ 45313033 (+) | True | G1179156 |
| TU1343973 | other | upstream | 501466 | 44967368 ~ 44969719 (+) | True | LOC110486526 |
| TU1343969 | other | upstream | 544868 | 44920363 ~ 44926317 (+) | True | LOC110485188 |
| TU1343925 | other | upstream | 607002 | 44859869 ~ 44864183 (+) | True | G1178425 |
| TU1345036 | other | downstream | 58021 | 45529436 ~ 45530128 (+) | True | LOC110485192 |
| TU1345697 | other | downstream | 702613 | 46174028 ~ 46176562 (+) | False | LOC118936304 |
| TU1345699 | other | downstream | 703067 | 46174482 ~ 46176562 (+) | True | LOC118936304 |
| TU1345745 | other | downstream | 767729 | 46239144 ~ 46273601 (+) | True | G1180047 |
| TU1345717 | other | downstream | 860303 | 46331718 ~ 46336278 (+) | True | LOC110485193 |
