Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1346277 |
| length | 1292 |
| lncRNA type | antisense_over |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G1180499 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 46331726 ~ 46334543 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1346284 | lncRNA | downstream | 29024 | 46302481 ~ 46302702 (-) | True | G1180506 |
| TU1346282 | lncRNA | downstream | 33459 | 46298028 ~ 46298267 (-) | True | G1180504 |
| TU1346266 | lncRNA | downstream | 49924 | 46281578 ~ 46281802 (-) | True | G1180493 |
| TU1346261 | lncRNA | downstream | 59477 | 46269902 ~ 46272249 (-) | True | G1180488 |
| TU1346069 | lncRNA | downstream | 148358 | 46179960 ~ 46183368 (-) | True | G1180309 |
| TU1346371 | lncRNA | upstream | 103379 | 46437922 ~ 46443184 (-) | True | G1180578 |
| TU1346375 | lncRNA | upstream | 108712 | 46443255 ~ 46446313 (-) | True | G1180582 |
| TU1346393 | lncRNA | upstream | 159637 | 46494180 ~ 46494722 (-) | True | G1180598 |
| TU1346394 | lncRNA | upstream | 163202 | 46497745 ~ 46497976 (-) | True | G1180599 |
| TU1346396 | lncRNA | upstream | 166018 | 46500561 ~ 46500790 (-) | True | G1180601 |
| XM_036941284.1 | mRNA | downstream | 77534 | 46245465 ~ 46254192 (-) | True | LOC118938311 |
| XM_021558278.2 | mRNA | downstream | 95799 | 46230384 ~ 46235927 (-) | False | LOC110486569 |
| XM_021558277.2 | mRNA | downstream | 95860 | 46230384 ~ 46235866 (-) | False | LOC110486569 |
| XM_021558279.2 | mRNA | downstream | 95863 | 46230385 ~ 46235863 (-) | True | LOC110486569 |
| XR_002468087.2 | mRNA | downstream | 102771 | 46214869 ~ 46228955 (-) | True | recql5 |
| XM_036941295.1 | mRNA | upstream | 2001 | 46336544 ~ 46392945 (-) | False | LOC110486575 |
| XM_036941293.1 | mRNA | upstream | 2001 | 46336544 ~ 46422380 (-) | False | LOC110486575 |
| XM_036941294.1 | mRNA | upstream | 2001 | 46336544 ~ 46422380 (-) | False | LOC110486575 |
| XM_036941288.1 | mRNA | upstream | 2001 | 46336544 ~ 46422381 (-) | False | LOC110486575 |
| XM_036941289.1 | mRNA | upstream | 2001 | 46336544 ~ 46422381 (-) | False | LOC110486575 |
| TU1345282 | other | downstream | 799064 | 45531858 ~ 45532662 (-) | True | G1179621 |
| TU1345280 | other | downstream | 801612 | 45529436 ~ 45530114 (-) | True | G1179619 |
| TU1344653 | other | downstream | 1138421 | 45183460 ~ 45193305 (-) | True | zgc:171844 |
| TU1344629 | other | downstream | 1244596 | 45085509 ~ 45087130 (-) | True | il-8 |
| TU1344593 | other | downstream | 1279702 | 45051576 ~ 45052024 (-) | True | G1178996 |
| TU1346367 | other | upstream | 178914 | 46513457 ~ 46535645 (-) | True | LOC110486586 |
| TU1346918 | other | upstream | 548885 | 46883428 ~ 46914902 (-) | False | LOC110486590 |
| TU1346919 | other | upstream | 548885 | 46883428 ~ 46915018 (-) | True | LOC110486590 |
| TU1347403 | other | upstream | 1098253 | 47432796 ~ 47433397 (-) | False | LOC110486593 |
| TU1347562 | other | upstream | 1127738 | 47462281 ~ 47466686 (-) | False | LOC110486594 |
