Item | Value |
---|---|
RNA id | TU1345957 |
length | 353 |
lncRNA type | inter_gene |
GC content | 0.47 |
exon number | 1 |
gene id | G1180211 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_048577.1 |
NCBI id | CM023231.2 |
chromosome length | 73332040 |
location | 46538779 ~ 46539131 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU1345956 | lncRNA | upstream | 94 | 46538308 ~ 46538685 (+) | True | G1180210 |
TU1345945 | lncRNA | upstream | 13511 | 46524198 ~ 46525268 (+) | True | G1180205 |
TU1345930 | lncRNA | upstream | 41071 | 46497470 ~ 46497708 (+) | True | G1180200 |
TU1345913 | lncRNA | upstream | 62700 | 46471970 ~ 46476079 (+) | False | G1180193 |
TU1345970 | lncRNA | downstream | 20896 | 46560027 ~ 46565394 (+) | False | LOC110486588 |
TU1345971 | lncRNA | downstream | 22655 | 46561786 ~ 46565394 (+) | False | LOC110486588 |
TU1345972 | lncRNA | downstream | 23503 | 46562634 ~ 46565394 (+) | True | LOC110486588 |
TU1346534 | lncRNA | downstream | 139003 | 46678134 ~ 46713117 (+) | True | G1180716 |
TU1346562 | lncRNA | downstream | 208135 | 46747266 ~ 46754851 (+) | True | G1180743 |
XM_021558298.2 | mRNA | upstream | 29538 | 46493946 ~ 46509241 (+) | True | LOC110486584 |
XM_021558294.2 | mRNA | upstream | 45047 | 46488100 ~ 46493732 (+) | False | LOC110486580 |
XM_036941298.1 | mRNA | upstream | 45156 | 46488490 ~ 46493623 (+) | True | LOC110486580 |
XM_021558296.2 | mRNA | upstream | 53679 | 46483136 ~ 46485100 (+) | False | mettl23 |
XM_021558300.2 | mRNA | downstream | 3061 | 46542192 ~ 46547913 (+) | True | foxj1a |
XM_021558302.2 | mRNA | downstream | 20677 | 46559808 ~ 46565672 (+) | False | LOC110486588 |
XM_036941303.1 | mRNA | downstream | 32111 | 46571242 ~ 46672347 (+) | False | LOC110486589 |
XM_021558307.2 | mRNA | downstream | 42652 | 46581783 ~ 46672347 (+) | True | LOC110486589 |
XM_036942626.1 | mRNA | downstream | 276876 | 46816007 ~ 46816999 (+) | True | LOC118938555 |
TU1345717 | other | upstream | 202501 | 46331718 ~ 46336278 (+) | True | LOC110485193 |
TU1345745 | other | upstream | 265178 | 46239144 ~ 46273601 (+) | True | G1180047 |
TU1345697 | other | upstream | 362217 | 46174028 ~ 46176562 (+) | False | LOC118936304 |
TU1345699 | other | upstream | 362217 | 46174482 ~ 46176562 (+) | True | LOC118936304 |
TU1345036 | other | upstream | 1008651 | 45529436 ~ 45530128 (+) | True | LOC110485192 |
TU1347316 | other | downstream | 835032 | 47374163 ~ 47374477 (+) | True | G1181472 |
TU1347462 | other | downstream | 928985 | 47468116 ~ 47470012 (+) | False | tmem100a |
TU1347459 | other | downstream | 929070 | 47468201 ~ 47470012 (+) | True | tmem100a |
TU1347506 | other | downstream | 1010148 | 47549279 ~ 47549548 (+) | True | G1181636 |
TU1347905 | other | downstream | 1203230 | 47742361 ~ 47743064 (+) | True | G1181955 |