Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1346601 |
| length | 586 |
| lncRNA type | read_through |
| GC content | 0.43 |
| exon number | 4 |
| gene id | G1180779 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 46815835 ~ 46819263 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1346578 | lncRNA | upstream | 2697 | 46761732 ~ 46813138 (+) | True | G1180758 |
| TU1346562 | lncRNA | upstream | 60984 | 46747266 ~ 46754851 (+) | True | G1180743 |
| TU1346534 | lncRNA | upstream | 102718 | 46678134 ~ 46713117 (+) | True | G1180716 |
| TU1345970 | lncRNA | upstream | 250441 | 46560027 ~ 46565394 (+) | False | LOC110486588 |
| TU1346673 | lncRNA | downstream | 108919 | 46928182 ~ 46928398 (+) | True | G1180844 |
| TU1346674 | lncRNA | downstream | 110261 | 46929524 ~ 46932162 (+) | True | G1180845 |
| TU1347318 | lncRNA | downstream | 555512 | 47374775 ~ 47375077 (+) | True | G1181474 |
| TU1347324 | lncRNA | downstream | 560537 | 47379800 ~ 47380035 (+) | True | G1181480 |
| TU1347347 | lncRNA | downstream | 584680 | 47403943 ~ 47406372 (+) | False | LOC110486592 |
| XM_036941303.1 | mRNA | upstream | 143488 | 46571242 ~ 46672347 (+) | False | LOC110486589 |
| XM_021558307.2 | mRNA | upstream | 143488 | 46581783 ~ 46672347 (+) | True | LOC110486589 |
| XM_021558302.2 | mRNA | upstream | 250163 | 46559808 ~ 46565672 (+) | False | LOC110486588 |
| XM_021558300.2 | mRNA | upstream | 267922 | 46542192 ~ 46547913 (+) | True | foxj1a |
| XM_021558298.2 | mRNA | upstream | 306594 | 46493946 ~ 46509241 (+) | True | LOC110486584 |
| XM_021558311.2 | mRNA | downstream | 576067 | 47395330 ~ 47400760 (+) | True | LOC110486591 |
| XM_036941313.1 | mRNA | downstream | 584511 | 47403774 ~ 47410322 (+) | False | LOC110486592 |
| XM_021558312.2 | mRNA | downstream | 584542 | 47403805 ~ 47410322 (+) | False | LOC110486592 |
| XM_036941314.1 | mRNA | downstream | 648749 | 47468012 ~ 47471205 (+) | False | tmem100a |
| XM_021558316.2 | mRNA | downstream | 662975 | 47482238 ~ 47505989 (+) | False | LOC110486595 |
| TU1345717 | other | upstream | 479557 | 46331718 ~ 46336278 (+) | True | LOC110485193 |
| TU1345745 | other | upstream | 542234 | 46239144 ~ 46273601 (+) | True | G1180047 |
| TU1345697 | other | upstream | 639273 | 46174028 ~ 46176562 (+) | False | LOC118936304 |
| TU1345699 | other | upstream | 639273 | 46174482 ~ 46176562 (+) | True | LOC118936304 |
| TU1345036 | other | upstream | 1285707 | 45529436 ~ 45530128 (+) | True | LOC110485192 |
| TU1347316 | other | downstream | 554900 | 47374163 ~ 47374477 (+) | True | G1181472 |
| TU1347462 | other | downstream | 648853 | 47468116 ~ 47470012 (+) | False | tmem100a |
| TU1347459 | other | downstream | 648938 | 47468201 ~ 47470012 (+) | True | tmem100a |
| TU1347506 | other | downstream | 730016 | 47549279 ~ 47549548 (+) | True | G1181636 |
| TU1347905 | other | downstream | 923098 | 47742361 ~ 47743064 (+) | True | G1181955 |
