Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1347534 |
| length | 167 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G1181660 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 47598070 ~ 47598236 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1347523 | lncRNA | upstream | 30954 | 47565031 ~ 47567116 (+) | True | G1181650 |
| TU1347515 | lncRNA | upstream | 40217 | 47557654 ~ 47557853 (+) | True | G1181645 |
| TU1347498 | lncRNA | upstream | 58322 | 47539427 ~ 47539748 (+) | True | G1181628 |
| TU1347486 | lncRNA | upstream | 74007 | 47523862 ~ 47524063 (+) | True | G1181616 |
| TU1347485 | lncRNA | upstream | 74617 | 47523224 ~ 47523453 (+) | True | G1181615 |
| TU1347658 | lncRNA | downstream | 3419 | 47601655 ~ 47703167 (+) | True | G1181774 |
| TU1347876 | lncRNA | downstream | 126588 | 47724824 ~ 47725173 (+) | True | G1181927 |
| TU1347891 | lncRNA | downstream | 133894 | 47732130 ~ 47732387 (+) | True | G1181941 |
| TU1347939 | lncRNA | downstream | 232612 | 47830848 ~ 47832800 (+) | False | LOC110486605 |
| TU1347940 | lncRNA | downstream | 233046 | 47831282 ~ 47832800 (+) | True | LOC110486605 |
| XM_021558316.2 | mRNA | upstream | 92081 | 47482238 ~ 47505989 (+) | False | LOC110486595 |
| XM_021558317.2 | mRNA | upstream | 93261 | 47488083 ~ 47504809 (+) | False | LOC110486595 |
| XM_036941315.1 | mRNA | upstream | 93261 | 47488142 ~ 47504809 (+) | True | LOC110486595 |
| XM_036941314.1 | mRNA | upstream | 126865 | 47468012 ~ 47471205 (+) | False | tmem100a |
| XM_036941313.1 | mRNA | upstream | 187748 | 47403774 ~ 47410322 (+) | False | LOC110486592 |
| XM_021558334.2 | mRNA | downstream | 232685 | 47830921 ~ 47832929 (+) | False | LOC110486605 |
| XM_036941323.1 | mRNA | downstream | 232685 | 47830921 ~ 47832931 (+) | False | LOC110486605 |
| XM_021558333.2 | mRNA | downstream | 234998 | 47833234 ~ 47836337 (+) | True | LOC110486603 |
| LOC110485199 | mRNA | downstream | 249176 | 47847412 ~ 47858242 (+) | True | LOC110485199 |
| XM_021558335.2 | mRNA | downstream | 277170 | 47875406 ~ 47912448 (+) | False | LOC110486607 |
| TU1347506 | other | upstream | 48522 | 47549279 ~ 47549548 (+) | True | G1181636 |
| TU1347462 | other | upstream | 128058 | 47468116 ~ 47470012 (+) | False | tmem100a |
| TU1347459 | other | upstream | 128058 | 47468201 ~ 47470012 (+) | True | tmem100a |
| TU1347316 | other | upstream | 223593 | 47374163 ~ 47374477 (+) | True | G1181472 |
| TU1345717 | other | upstream | 1261792 | 46331718 ~ 46336278 (+) | True | LOC110485193 |
| TU1347905 | other | downstream | 144125 | 47742361 ~ 47743064 (+) | True | G1181955 |
| TU1348132 | other | downstream | 521377 | 48119613 ~ 48122575 (+) | True | G1182153 |
| TU1348348 | other | downstream | 957778 | 48556014 ~ 48561624 (+) | True | G1182354 |
| TU1348583 | other | downstream | 1348513 | 48946749 ~ 48947969 (+) | True | G1182541 |
| TU1348602 | other | downstream | 1379764 | 48978000 ~ 48981403 (+) | True | G1182555 |
