Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1348088 |
| length | 227 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G1182110 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 48032178 ~ 48032404 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1348085 | lncRNA | upstream | 6404 | 48025184 ~ 48025774 (+) | True | G1182107 |
| TU1348072 | lncRNA | upstream | 28674 | 47999598 ~ 48003504 (+) | True | G1182094 |
| TU1347939 | lncRNA | upstream | 199378 | 47830848 ~ 47832800 (+) | False | LOC110486605 |
| TU1347940 | lncRNA | upstream | 199378 | 47831282 ~ 47832800 (+) | True | LOC110486605 |
| TU1347891 | lncRNA | upstream | 299791 | 47732130 ~ 47732387 (+) | True | G1181941 |
| TU1348103 | lncRNA | downstream | 60604 | 48093008 ~ 48094934 (+) | True | LOC110486620 |
| TU1348108 | lncRNA | downstream | 75372 | 48107776 ~ 48108141 (+) | True | G1182130 |
| TU1348163 | lncRNA | downstream | 134661 | 48167065 ~ 48168051 (+) | True | G1182182 |
| TU1348177 | lncRNA | downstream | 155435 | 48187839 ~ 48188082 (+) | True | G1182196 |
| TU1348185 | lncRNA | downstream | 164404 | 48196808 ~ 48197030 (+) | True | G1182204 |
| XM_021558358.2 | mRNA | upstream | 40171 | 47984789 ~ 47992007 (+) | False | LOC110486616 |
| XM_021558360.2 | mRNA | upstream | 40171 | 47985236 ~ 47992007 (+) | True | LOC110486616 |
| XM_021558354.2 | mRNA | upstream | 47688 | 47962014 ~ 47984490 (+) | True | LOC110486615 |
| XM_021558355.2 | mRNA | upstream | 49835 | 47962014 ~ 47982343 (+) | False | LOC110486615 |
| XR_002468287.2 | mRNA | downstream | 788 | 48033192 ~ 48037545 (+) | True | LOC110487551 |
| XM_036941328.1 | mRNA | downstream | 43577 | 48075981 ~ 48091316 (+) | True | LOC110486621 |
| XM_036939759.1 | mRNA | downstream | 62007 | 48094411 ~ 48102030 (+) | False | LOC110486620 |
| XM_021556162.2 | mRNA | downstream | 86912 | 48119316 ~ 48135524 (+) | False | rac2 |
| NM_001165150.1 | mRNA | downstream | 87027 | 48119431 ~ 48136319 (+) | True | rac2 |
| TU1347905 | other | upstream | 289114 | 47742361 ~ 47743064 (+) | True | G1181955 |
| TU1347506 | other | upstream | 482630 | 47549279 ~ 47549548 (+) | True | G1181636 |
| TU1347462 | other | upstream | 562166 | 47468116 ~ 47470012 (+) | False | tmem100a |
| TU1347459 | other | upstream | 562166 | 47468201 ~ 47470012 (+) | True | tmem100a |
| TU1347316 | other | upstream | 657701 | 47374163 ~ 47374477 (+) | True | G1181472 |
| TU1348132 | other | downstream | 87209 | 48119613 ~ 48122575 (+) | True | G1182153 |
| TU1348348 | other | downstream | 523610 | 48556014 ~ 48561624 (+) | True | G1182354 |
| TU1348583 | other | downstream | 914345 | 48946749 ~ 48947969 (+) | True | G1182541 |
| TU1348602 | other | downstream | 945596 | 48978000 ~ 48981403 (+) | True | G1182555 |
| TU1348645 | other | downstream | 1031381 | 49063785 ~ 49065142 (+) | True | G1182595 |
