Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1348332 |
| length | 200 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G1182341 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 48516084 ~ 48516283 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1348328 | lncRNA | upstream | 22589 | 48492064 ~ 48493495 (+) | True | LOC110486639 |
| TU1348325 | lncRNA | upstream | 37474 | 48470203 ~ 48478610 (+) | True | G1182334 |
| TU1348308 | lncRNA | upstream | 43413 | 48469378 ~ 48472671 (+) | True | G1182317 |
| TU1348309 | lncRNA | upstream | 48676 | 48464880 ~ 48467408 (+) | True | G1182318 |
| TU1348322 | lncRNA | upstream | 53930 | 48454291 ~ 48462154 (+) | True | G1182331 |
| TU1348333 | lncRNA | downstream | 298 | 48516581 ~ 48520449 (+) | True | G1182342 |
| TU1348336 | lncRNA | downstream | 12631 | 48528914 ~ 48529433 (+) | True | G1182344 |
| TU1348342 | lncRNA | downstream | 20544 | 48536827 ~ 48537060 (+) | True | G1182350 |
| TU1348354 | lncRNA | downstream | 47534 | 48563817 ~ 48564807 (+) | True | G1182359 |
| TU1348384 | lncRNA | downstream | 105584 | 48621867 ~ 48622758 (+) | True | LOC110486647 |
| XM_021558400.2 | mRNA | upstream | 9876 | 48500511 ~ 48506208 (+) | False | ifi35 |
| XM_021558398.2 | mRNA | upstream | 9876 | 48500525 ~ 48506208 (+) | True | ifi35 |
| XM_021558395.2 | mRNA | upstream | 17409 | 48496613 ~ 48498675 (+) | True | LOC110486640 |
| XM_021558393.2 | mRNA | upstream | 22565 | 48488445 ~ 48493519 (+) | False | LOC110486639 |
| XM_021558394.2 | mRNA | upstream | 22565 | 48488445 ~ 48493519 (+) | False | LOC110486639 |
| XM_036941349.1 | mRNA | downstream | 16227 | 48532510 ~ 48540487 (+) | False | LOC110486644 |
| XM_021558403.2 | mRNA | downstream | 16255 | 48532538 ~ 48540487 (+) | True | LOC110486644 |
| XM_036941351.1 | mRNA | downstream | 82695 | 48598978 ~ 48622190 (+) | False | LOC110486647 |
| XM_036941354.1 | mRNA | downstream | 181920 | 48698203 ~ 48704379 (+) | False | LOC110486650 |
| XM_021558410.2 | mRNA | downstream | 184313 | 48700596 ~ 48704379 (+) | False | LOC110486650 |
| TU1348132 | other | upstream | 393509 | 48119613 ~ 48122575 (+) | True | G1182153 |
| TU1347905 | other | upstream | 773020 | 47742361 ~ 47743064 (+) | True | G1181955 |
| TU1347506 | other | upstream | 966536 | 47549279 ~ 47549548 (+) | True | G1181636 |
| TU1347462 | other | upstream | 1046072 | 47468116 ~ 47470012 (+) | False | tmem100a |
| TU1348348 | other | downstream | 39731 | 48556014 ~ 48561624 (+) | True | G1182354 |
| TU1348583 | other | downstream | 430466 | 48946749 ~ 48947969 (+) | True | G1182541 |
| TU1348602 | other | downstream | 461717 | 48978000 ~ 48981403 (+) | True | G1182555 |
| TU1348645 | other | downstream | 547502 | 49063785 ~ 49065142 (+) | True | G1182595 |
| TU1348688 | other | downstream | 598692 | 49114975 ~ 49118697 (+) | True | G1182629 |
