Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1349803 |
| length | 202 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 1 |
| gene id | G1183567 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 49317282 ~ 49317483 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1349424 | lncRNA | downstream | 17418 | 49295176 ~ 49299864 (-) | False | G1183273 |
| TU1349425 | lncRNA | downstream | 17418 | 49295176 ~ 49299864 (-) | False | G1183273 |
| TU1349428 | lncRNA | downstream | 17418 | 49295176 ~ 49299864 (-) | False | G1183273 |
| TU1349429 | lncRNA | downstream | 17418 | 49295176 ~ 49299864 (-) | False | G1183273 |
| TU1349432 | lncRNA | downstream | 17418 | 49296056 ~ 49299864 (-) | True | G1183273 |
| TU1349461 | lncRNA | upstream | 7544 | 49325027 ~ 49325527 (-) | True | G1183297 |
| TU1349825 | lncRNA | upstream | 115454 | 49432937 ~ 49433171 (-) | True | G1183588 |
| TU1349827 | lncRNA | upstream | 118285 | 49435768 ~ 49435981 (-) | True | G1183590 |
| TU1349829 | lncRNA | upstream | 121668 | 49439151 ~ 49439353 (-) | True | G1183592 |
| TU1349832 | lncRNA | upstream | 126881 | 49444364 ~ 49444722 (-) | True | G1183595 |
| XM_021558448.2 | mRNA | downstream | 4293 | 49300153 ~ 49312989 (-) | True | LOC110486679 |
| XM_021558449.2 | mRNA | downstream | 4295 | 49300153 ~ 49312987 (-) | False | LOC110486679 |
| XM_021558447.2 | mRNA | downstream | 36172 | 49278149 ~ 49281110 (-) | True | cd2bp2 |
| XM_021558445.2 | mRNA | downstream | 39483 | 49267608 ~ 49277799 (-) | False | prr14 |
| XM_036941388.1 | mRNA | downstream | 39483 | 49267608 ~ 49277799 (-) | True | prr14 |
| XM_021558451.2 | mRNA | upstream | 9239 | 49326722 ~ 49339857 (-) | True | hsd3b7 |
| XM_036941391.1 | mRNA | upstream | 29057 | 49346540 ~ 49360939 (-) | False | setd1a |
| XM_036941393.1 | mRNA | upstream | 29057 | 49346540 ~ 49360941 (-) | False | setd1a |
| XM_036941392.1 | mRNA | upstream | 29057 | 49346540 ~ 49361234 (-) | False | setd1a |
| XM_021558452.2 | mRNA | upstream | 47935 | 49365418 ~ 49369859 (-) | True | LOC110486683 |
| TU1349479 | other | downstream | 339874 | 48973183 ~ 48977408 (-) | True | LOC110485205 |
| TU1349473 | other | downstream | 380825 | 48897679 ~ 48936457 (-) | True | LOC110486656 |
| TU1349502 | other | downstream | 649200 | 48667788 ~ 48668082 (-) | True | G1183337 |
| TU1349369 | other | downstream | 846299 | 48435826 ~ 48470983 (-) | True | G1183225 |
| TU1349334 | other | downstream | 927564 | 48379267 ~ 48389718 (-) | True | G1183196 |
| TU1349475 | other | upstream | 38895 | 49356378 ~ 49357214 (-) | True | setd1a |
| TU1349433 | other | upstream | 169443 | 49486926 ~ 49504010 (-) | False | LOC110486687 |
| TU1349434 | other | upstream | 169443 | 49486926 ~ 49504010 (-) | True | LOC110486687 |
| TU1349444 | other | upstream | 219716 | 49537199 ~ 49544276 (-) | True | LOC118938314 |
| TU1349952 | other | upstream | 367855 | 49685338 ~ 49688456 (-) | True | G1183706 |
