Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1348777 |
| length | 236 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G1182707 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 49323938 ~ 49324173 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1348775 | lncRNA | upstream | 3807 | 49319803 ~ 49320131 (+) | True | G1182705 |
| TU1348768 | lncRNA | upstream | 12671 | 49310100 ~ 49311267 (+) | True | G1182700 |
| TU1348662 | lncRNA | upstream | 20307 | 49300201 ~ 49303631 (+) | True | G1182611 |
| TU1348683 | lncRNA | upstream | 174014 | 49147778 ~ 49149924 (+) | True | G1182627 |
| TU1348679 | lncRNA | upstream | 175645 | 49104102 ~ 49148293 (+) | False | G1182627 |
| TU1348781 | lncRNA | downstream | 26222 | 49350395 ~ 49352361 (+) | True | G1182711 |
| TU1348796 | lncRNA | downstream | 39876 | 49364049 ~ 49365202 (+) | True | G1182724 |
| TU1348797 | lncRNA | downstream | 62049 | 49386222 ~ 49388178 (+) | True | G1182725 |
| TU1348824 | lncRNA | downstream | 114805 | 49438978 ~ 49439207 (+) | True | G1182750 |
| TU1348827 | lncRNA | downstream | 117552 | 49441725 ~ 49441944 (+) | True | G1182753 |
| NM_001124679.1 | mRNA | upstream | 24687 | 49295336 ~ 49299251 (+) | True | LOC100136718 |
| LOC110486677 | mRNA | upstream | 39822 | 49281106 ~ 49284116 (+) | False | LOC110486677 |
| XR_002468097.2 | mRNA | upstream | 57171 | 49263529 ~ 49266767 (+) | False | LOC110486678 |
| XM_021558439.2 | mRNA | upstream | 110519 | 49210465 ~ 49213419 (+) | True | LOC110486670 |
| XM_021558440.2 | mRNA | upstream | 121245 | 49200943 ~ 49202693 (+) | False | LOC110486671 |
| XM_021558453.2 | mRNA | downstream | 46065 | 49370238 ~ 49384522 (+) | True | LOC110486684 |
| XM_021558462.2 | mRNA | downstream | 198357 | 49522530 ~ 49530730 (+) | False | LOC110486690 |
| XM_021558463.2 | mRNA | downstream | 198357 | 49522530 ~ 49530730 (+) | False | LOC110486690 |
| XM_021558466.2 | mRNA | downstream | 198357 | 49522530 ~ 49530730 (+) | False | LOC110486690 |
| XM_021558464.2 | mRNA | downstream | 198370 | 49522543 ~ 49530733 (+) | False | LOC110486690 |
| TU1348751 | other | upstream | 40435 | 49281659 ~ 49283503 (+) | True | LOC110486677 |
| TU1348666 | other | upstream | 57167 | 49263650 ~ 49266771 (+) | True | LOC110486678 |
| TU1348657 | other | upstream | 121248 | 49200986 ~ 49202690 (+) | True | LOC110486671 |
| TU1348688 | other | upstream | 205241 | 49114975 ~ 49118697 (+) | True | G1182629 |
| TU1348645 | other | upstream | 258796 | 49063785 ~ 49065142 (+) | True | G1182595 |
| TU1348815 | other | downstream | 95397 | 49419570 ~ 49426223 (+) | False | G1182742 |
| TU1348816 | other | downstream | 95397 | 49419570 ~ 49422762 (+) | True | G1182742 |
| TU1348832 | other | downstream | 256153 | 49580326 ~ 49584562 (+) | True | ndua4 |
| TU1350070 | other | downstream | 508048 | 49832221 ~ 49835014 (+) | True | G1183819 |
| TU1350149 | other | downstream | 558648 | 49882821 ~ 49883435 (+) | True | G1183875 |
