Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1349843 |
| length | 239 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G1183605 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 49462499 ~ 49462737 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1349842 | lncRNA | downstream | 653 | 49461492 ~ 49461846 (-) | True | G1183604 |
| TU1349832 | lncRNA | downstream | 17777 | 49444364 ~ 49444722 (-) | True | G1183595 |
| TU1349829 | lncRNA | downstream | 23146 | 49439151 ~ 49439353 (-) | True | G1183592 |
| TU1349827 | lncRNA | downstream | 26518 | 49435768 ~ 49435981 (-) | True | G1183590 |
| TU1349825 | lncRNA | downstream | 29328 | 49432937 ~ 49433171 (-) | True | G1183588 |
| TU1349455 | lncRNA | upstream | 5032 | 49467769 ~ 49468817 (-) | True | LOC110486686 |
| TU1349848 | lncRNA | upstream | 10695 | 49473432 ~ 49473756 (-) | True | G1183609 |
| TU1349859 | lncRNA | upstream | 49001 | 49511738 ~ 49512014 (-) | True | G1183620 |
| TU1349863 | lncRNA | upstream | 60847 | 49523584 ~ 49524166 (-) | True | G1183624 |
| TU1349883 | lncRNA | upstream | 107237 | 49569974 ~ 49570178 (-) | True | G1183641 |
| XM_021558456.2 | mRNA | downstream | 6220 | 49448242 ~ 49456279 (-) | True | LOC100136168 |
| NM_001124676.1 | mRNA | downstream | 33148 | 49388158 ~ 49429351 (-) | True | kcnh2 |
| XM_021558452.2 | mRNA | downstream | 92640 | 49365418 ~ 49369859 (-) | True | LOC110486683 |
| XM_036941392.1 | mRNA | downstream | 101265 | 49346540 ~ 49361234 (-) | False | setd1a |
| XM_036941393.1 | mRNA | downstream | 101558 | 49346540 ~ 49360941 (-) | False | setd1a |
| XM_036941395.1 | mRNA | upstream | 5029 | 49467766 ~ 49485525 (-) | False | LOC110486686 |
| XM_021558458.2 | mRNA | upstream | 24080 | 49486817 ~ 49504039 (-) | False | LOC110486687 |
| XM_036941396.1 | mRNA | upstream | 24080 | 49486817 ~ 49504819 (-) | False | LOC110486687 |
| XM_021558461.2 | mRNA | upstream | 52313 | 49515050 ~ 49521957 (-) | False | LOC110486688 |
| XM_021558460.2 | mRNA | upstream | 53575 | 49516312 ~ 49522522 (-) | True | LOC110486688 |
| TU1349475 | other | downstream | 105285 | 49356378 ~ 49357214 (-) | True | setd1a |
| TU1349479 | other | downstream | 485091 | 48973183 ~ 48977408 (-) | True | LOC110485205 |
| TU1349473 | other | downstream | 526042 | 48897679 ~ 48936457 (-) | True | LOC110486656 |
| TU1349502 | other | downstream | 794417 | 48667788 ~ 48668082 (-) | True | G1183337 |
| TU1349369 | other | downstream | 991516 | 48435826 ~ 48470983 (-) | True | G1183225 |
| TU1349433 | other | upstream | 24189 | 49486926 ~ 49504010 (-) | False | LOC110486687 |
| TU1349434 | other | upstream | 24189 | 49486926 ~ 49504010 (-) | True | LOC110486687 |
| TU1349444 | other | upstream | 74462 | 49537199 ~ 49544276 (-) | True | LOC118938314 |
| TU1349952 | other | upstream | 222601 | 49685338 ~ 49688456 (-) | True | G1183706 |
| TU1350091 | other | upstream | 372926 | 49835663 ~ 49836332 (-) | True | LOC110486698 |
