Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00042873 |
| length | 1306 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 6 |
| gene id | XLOC_021599 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007134.7 |
| NCBI id | CM002907.2 |
| chromosome length | 46223584 |
| location | 18527028 ~ 18543359 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0001992 | regulation of systemic arterial blood pressure by vasopressin | biological_process |
| GO:0045907 | positive regulation of vasoconstriction | biological_process |
| GO:0007165 | signal transduction | biological_process |
| GO:0005887 | integral component of plasma membrane | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| GO:0042277 | peptide binding | molecular_function |
| GO:0005000 | vasopressin receptor activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-110411-48 | Predicted to enable peptide binding activity and vasopressin receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway; positive regulation of vasoconstriction; and regulation of systemic arterial blood pressure by vasopressin. Predicted to act upstream of or within signal transduction. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Human ortholog(s) of this gene implicated in nephrogenic diabetes insipidus and nephrogenic syndrome of inappropriate antidiuresis. Orthologous to human AVPR2 (arginine vasopressin receptor 2). |
| ensembl_id | ENSDART00000148769 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00044809 | lncRNA | upstream | 390941 | 18134562 ~ 18136294 (+) | False | XLOC_021597 |
| TCONS_00044810 | lncRNA | upstream | 390941 | 18134759 ~ 18136294 (+) | False | XLOC_021597 |
| TCONS_00044670 | lncRNA | upstream | 391067 | 18135571 ~ 18136168 (+) | True | XLOC_021597 |
| TCONS_00044669 | lncRNA | upstream | 391738 | 18134466 ~ 18135497 (+) | False | XLOC_021597 |
| TCONS_00042866 | lncRNA | upstream | 394912 | 18129860 ~ 18132323 (+) | True | XLOC_021595 |
| TCONS_00042874 | lncRNA | downstream | 144995 | 18688354 ~ 18691482 (+) | False | XLOC_021600 |
| TCONS_00042876 | lncRNA | downstream | 145366 | 18688725 ~ 18691482 (+) | True | XLOC_021600 |
| TCONS_00044811 | lncRNA | downstream | 381111 | 18924470 ~ 18929002 (+) | True | XLOC_021604 |
| TCONS_00042882 | lncRNA | downstream | 508126 | 19051485 ~ 19066987 (+) | True | XLOC_021606 |
| TCONS_00042883 | lncRNA | downstream | 562187 | 19105546 ~ 19119441 (+) | False | XLOC_021607 |
| TCONS_00042867 | mRNA | upstream | 382002 | 18134313 ~ 18145233 (+) | False | XLOC_021596 |
| TCONS_00042868 | mRNA | upstream | 382042 | 18138589 ~ 18145193 (+) | True | XLOC_021596 |
| TCONS_00042865 | mRNA | upstream | 412345 | 18103080 ~ 18114890 (+) | True | XLOC_021594 |
| TCONS_00042863 | mRNA | upstream | 533572 | 17981127 ~ 17993663 (+) | False | XLOC_021593 |
| TCONS_00042862 | mRNA | upstream | 533786 | 17980875 ~ 17993449 (+) | False | XLOC_021593 |
| TCONS_00042877 | mRNA | downstream | 179356 | 18722715 ~ 18757078 (+) | False | XLOC_021601 |
| TCONS_00042878 | mRNA | downstream | 179556 | 18722915 ~ 18754439 (+) | True | XLOC_021601 |
| TCONS_00042880 | mRNA | downstream | 235684 | 18779043 ~ 18794561 (+) | True | XLOC_021603 |
| TCONS_00042881 | mRNA | downstream | 401029 | 18944388 ~ 18951148 (+) | True | XLOC_021605 |
| TCONS_00042884 | mRNA | downstream | 562789 | 19106148 ~ 19119443 (+) | False | XLOC_021607 |
| TCONS_00042869 | other | upstream | 238034 | 18289074 ~ 18289201 (+) | True | XLOC_021598 |
| TCONS_00042854 | other | upstream | 653088 | 17874072 ~ 17874147 (+) | True | XLOC_021587 |
| TCONS_00042853 | other | upstream | 653637 | 17873526 ~ 17873598 (+) | True | XLOC_021588 |
| TCONS_00042843 | other | upstream | 743694 | 17783413 ~ 17783541 (+) | True | XLOC_021584 |
| TCONS_00042836 | other | upstream | 1025807 | 17501314 ~ 17501428 (+) | True | XLOC_021579 |
| TCONS_00042875 | other | downstream | 144998 | 18688357 ~ 18691482 (+) | False | XLOC_021600 |
| TCONS_00042879 | other | downstream | 187963 | 18731322 ~ 18731399 (+) | True | XLOC_021602 |
| TCONS_00042887 | other | downstream | 634532 | 19177891 ~ 19182388 (+) | False | XLOC_021608 |
| TCONS_00042896 | other | downstream | 674169 | 19217528 ~ 19218940 (+) | True | XLOC_021613 |
| TCONS_00042898 | other | downstream | 1016715 | 19560074 ~ 19577246 (+) | False | XLOC_021615 |
