Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1382127 |
| length | 735 |
| lncRNA type | sense_over |
| GC content | 0.44 |
| exon number | 2 |
| gene id | LOC110488658 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 7175176 ~ 7228229 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0070588 | calcium ion transmembrane transport | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005262 | calcium channel activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1381772 | lncRNA | upstream | 140005 | 7086660 ~ 7087463 (+) | True | LOC118938692 |
| TU1381776 | lncRNA | upstream | 145581 | 7046736 ~ 7081887 (+) | True | LOC110488657 |
| TU1381848 | lncRNA | upstream | 193650 | 7012757 ~ 7033818 (+) | True | G1210049 |
| TU1381847 | lncRNA | upstream | 212070 | 7000733 ~ 7015398 (+) | False | G1210049 |
| TU1382172 | lncRNA | downstream | 16833 | 7245062 ~ 7245273 (+) | True | G1210338 |
| TU1382370 | lncRNA | downstream | 187530 | 7415759 ~ 7417025 (+) | True | G1210496 |
| TU1382371 | lncRNA | downstream | 188849 | 7417078 ~ 7417464 (+) | True | G1210497 |
| TU1382375 | lncRNA | downstream | 196339 | 7424568 ~ 7424923 (+) | True | G1210501 |
| TU1382395 | lncRNA | downstream | 227682 | 7455911 ~ 7459023 (+) | False | LOC118938693 |
| XM_036942768.1 | mRNA | upstream | 140752 | 7083183 ~ 7086716 (+) | False | LOC118938692 |
| XM_036942766.1 | mRNA | upstream | 145475 | 6940410 ~ 7081993 (+) | False | LOC110488657 |
| XM_036942765.1 | mRNA | upstream | 145475 | 6941117 ~ 7081993 (+) | False | LOC110488657 |
| NM_001165140.1 | mRNA | upstream | 289558 | 6933060 ~ 6937910 (+) | True | dock2 |
| XM_036942763.1 | mRNA | upstream | 340943 | 6845220 ~ 6886525 (+) | False | LOC110488650 |
| XM_036942770.1 | mRNA | downstream | 19550 | 7247779 ~ 7249658 (+) | True | LOC110488659 |
| XM_036942774.1 | mRNA | downstream | 23136 | 7251365 ~ 7385487 (+) | False | LOC110488661 |
| XM_036942772.1 | mRNA | downstream | 23137 | 7251366 ~ 7385487 (+) | False | LOC110488661 |
| XM_036942775.1 | mRNA | downstream | 23137 | 7251366 ~ 7385487 (+) | False | LOC110488661 |
| XM_036942771.1 | mRNA | downstream | 23138 | 7251367 ~ 7385487 (+) | False | LOC110488661 |
| TU1381317 | other | upstream | 470657 | 6753137 ~ 6756811 (+) | False | G1209572 |
| TU1381321 | other | upstream | 470753 | 6753137 ~ 6756715 (+) | True | G1209572 |
| TU1381318 | other | upstream | 471127 | 6752957 ~ 6756341 (+) | False | G1209572 |
| TU1381375 | other | upstream | 475754 | 6751352 ~ 6751714 (+) | True | G1209622 |
| TU1381366 | other | upstream | 482678 | 6743934 ~ 6744790 (+) | True | G1209615 |
| TU1382289 | other | downstream | 90791 | 7319020 ~ 7321287 (+) | True | LOC110488661 |
| TU1382376 | other | downstream | 204148 | 7432377 ~ 7435168 (+) | True | G1210502 |
| TU1382403 | other | downstream | 231619 | 7459848 ~ 7481225 (+) | False | G1210520 |
| TU1382615 | other | downstream | 582902 | 7811131 ~ 7811872 (+) | True | G1210695 |
| TU1382628 | other | downstream | 600594 | 7828823 ~ 7836843 (+) | True | G1210708 |
