Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00043187 |
| length | 778 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 4 |
| gene id | XLOC_021768 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007134.7 |
| NCBI id | CM002907.2 |
| chromosome length | 46223584 |
| location | 29883216 ~ 29888793 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006397 | mRNA processing | biological_process |
| GO:0005739 | mitochondrion | cellular_component |
| GO:0003674 | molecular_function | molecular_function |
| id | description |
|---|---|
| ko03036 | Chromosome and associated proteins |
| id | description |
|---|---|
| ZDB-GENE-070928-24 | Predicted to be involved in mRNA processing. Predicted to be active in mitochondrion. Orthologous to human AURKAIP1 (aurora kinase A interacting protein 1). |
| ensembl_id | ENSDART00000148706 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00044848 | lncRNA | upstream | 36342 | 29840859 ~ 29846879 (+) | True | XLOC_021767 |
| TCONS_00044847 | lncRNA | upstream | 299942 | 29580543 ~ 29583279 (+) | True | XLOC_021765 |
| TCONS_00043183 | lncRNA | upstream | 308867 | 29572078 ~ 29574354 (+) | True | XLOC_021764 |
| TCONS_00044846 | lncRNA | upstream | 481125 | 29396181 ~ 29402096 (+) | True | XLOC_021763 |
| TCONS_00044845 | lncRNA | upstream | 522356 | 29358666 ~ 29360865 (+) | True | XLOC_021762 |
| TCONS_00043195 | lncRNA | downstream | 118934 | 30006206 ~ 30009399 (+) | False | XLOC_021772 |
| TCONS_00043197 | lncRNA | downstream | 118934 | 30006206 ~ 30010042 (+) | False | XLOC_021772 |
| TCONS_00043198 | lncRNA | downstream | 118964 | 30006236 ~ 30009190 (+) | True | XLOC_021772 |
| TCONS_00044849 | lncRNA | downstream | 515042 | 30402314 ~ 30433385 (+) | True | XLOC_021774 |
| TCONS_00043203 | lncRNA | downstream | 877015 | 30764287 ~ 30772886 (+) | True | XLOC_021777 |
| TCONS_00043182 | mRNA | upstream | 307530 | 29570386 ~ 29575691 (+) | False | XLOC_021764 |
| TCONS_00043181 | mRNA | upstream | 308477 | 29569893 ~ 29574744 (+) | False | XLOC_021764 |
| TCONS_00043177 | mRNA | upstream | 521603 | 29357790 ~ 29361618 (+) | False | XLOC_021762 |
| TCONS_00043180 | mRNA | upstream | 522052 | 29358188 ~ 29361169 (+) | False | XLOC_021762 |
| TCONS_00043176 | mRNA | upstream | 522356 | 29357790 ~ 29360865 (+) | False | XLOC_021762 |
| TCONS_00043189 | mRNA | downstream | 1817 | 29889089 ~ 29895258 (+) | False | XLOC_021769 |
| TCONS_00043190 | mRNA | downstream | 1857 | 29889129 ~ 29906163 (+) | True | XLOC_021769 |
| TCONS_00043191 | mRNA | downstream | 21076 | 29908348 ~ 29912263 (+) | False | XLOC_021770 |
| TCONS_00043192 | mRNA | downstream | 21076 | 29908348 ~ 29938201 (+) | True | XLOC_021770 |
| TCONS_00043193 | mRNA | downstream | 79194 | 29966466 ~ 29992458 (+) | False | XLOC_021771 |
| TCONS_00043184 | other | upstream | 294663 | 29588444 ~ 29588558 (+) | True | XLOC_021766 |
| TCONS_00043178 | other | upstream | 520376 | 29357790 ~ 29362845 (+) | False | XLOC_021762 |
| TCONS_00043179 | other | upstream | 520688 | 29357952 ~ 29362533 (+) | False | XLOC_021762 |
| TCONS_00043174 | other | upstream | 957181 | 28925923 ~ 28926040 (+) | True | XLOC_021760 |
| TCONS_00043173 | other | upstream | 979765 | 28903330 ~ 28903456 (+) | True | XLOC_021759 |
| TCONS_00043209 | other | downstream | 1092113 | 30979385 ~ 30979499 (+) | True | XLOC_021782 |
| TCONS_00043219 | other | downstream | 1546001 | 31433273 ~ 31433348 (+) | True | XLOC_021790 |
| TCONS_00043220 | other | downstream | 1546307 | 31433579 ~ 31433663 (+) | True | XLOC_021791 |
| TCONS_00043223 | other | downstream | 1780157 | 31667429 ~ 31667543 (+) | True | XLOC_021793 |
| TCONS_00043229 | other | downstream | 2046403 | 31933675 ~ 31940874 (+) | True | XLOC_021797 |
