Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036943169.1 |
| length | 3667 |
| RNA type | mRNA |
| GC content | 0.40 |
| exon number | 2 |
| gene id | LOC110489012 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 23868568 ~ 23873598 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
23,866,000
23,867,000
23,868,000
23,869,000
23,870,000
23,871,000
23,872,000
23,873,000
23,874,000
23,875,000
23,876,000
23,877,000
NC_048578.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1402640 | lncRNA | upstream | 30629 | 23836490 ~ 23839105 (+) | True | G1229061 |
| TU1402467 | lncRNA | upstream | 246877 | 23621377 ~ 23622857 (+) | False | shisa3 |
| TU1402461 | lncRNA | upstream | 246877 | 23621416 ~ 23622857 (+) | True | shisa3 |
| TU1402457 | lncRNA | upstream | 256287 | 23612872 ~ 23613447 (+) | True | G1228903 |
| TU1402453 | lncRNA | upstream | 260392 | 23608757 ~ 23609342 (+) | True | G1228900 |
| TU1403452 | lncRNA | downstream | 140247 | 24013845 ~ 24014082 (+) | True | G1229788 |
| TU1403488 | lncRNA | downstream | 158012 | 24031610 ~ 24031882 (+) | True | G1229823 |
| TU1403548 | lncRNA | downstream | 200992 | 24074590 ~ 24075012 (+) | True | G1229883 |
| TU1403549 | lncRNA | downstream | 201866 | 24075464 ~ 24076005 (+) | True | G1229884 |
| TU1403559 | lncRNA | downstream | 218427 | 24092025 ~ 24092345 (+) | True | G1229894 |
| XM_021561544.2 | mRNA | upstream | 39500 | 23825374 ~ 23830234 (+) | True | grxcr1a |
| XM_021561539.2 | mRNA | upstream | 246871 | 23616713 ~ 23622863 (+) | False | shisa3 |
| XR_005035956.1 | mRNA | upstream | 295757 | 23572973 ~ 23573977 (+) | True | LOC118938707 |
| XM_021561530.2 | mRNA | upstream | 548077 | 23314948 ~ 23321657 (+) | False | ky |
| XM_036943178.1 | mRNA | downstream | 526885 | 24400483 ~ 24439204 (+) | True | LOC110489017 |
| XR_005035957.1 | mRNA | downstream | 577834 | 24451432 ~ 24455925 (+) | False | LOC110489020 |
| NM_001160645.1 | mRNA | downstream | 593089 | 24466687 ~ 24474857 (+) | True | csn6 |
| XM_036943181.1 | mRNA | downstream | 665568 | 24539166 ~ 24551802 (+) | False | gpc2 |
| XM_036943183.1 | mRNA | downstream | 728474 | 24602072 ~ 24608023 (+) | False | LOC110489028 |
| TU1402466 | other | upstream | 248486 | 23616723 ~ 23621248 (+) | False | shisa3 |
| TU1402464 | other | upstream | 248486 | 23616857 ~ 23621248 (+) | False | shisa3 |
| TU1401977 | other | upstream | 1016073 | 22853315 ~ 22853661 (+) | True | G1228466 |
| TU1399161 | other | upstream | 3173597 | 20695672 ~ 20696137 (+) | True | G1225840 |
| TU1398501 | other | upstream | 3555624 | 20308619 ~ 20314110 (+) | True | LOC110488973 |
| TU1403926 | other | downstream | 574702 | 24448300 ~ 24455897 (+) | False | LOC110489020 |
| TU1403927 | other | downstream | 574975 | 24448573 ~ 24455897 (+) | False | LOC110489020 |
| TU1403929 | other | downstream | 574975 | 24448573 ~ 24455897 (+) | False | LOC110489020 |
| TU1403931 | other | downstream | 576840 | 24450438 ~ 24458335 (+) | True | LOC110489020 |
| TU1405688 | other | downstream | 2073114 | 25946712 ~ 25952747 (+) | True | G1231863 |
