Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00043266 |
| length | 904 |
| RNA type | processed_transcript |
| GC content | 0.48 |
| exon number | 6 |
| gene id | XLOC_021818 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007134.7 |
| NCBI id | CM002907.2 |
| chromosome length | 46223584 |
| location | 33294633 ~ 33309622 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007165 | signal transduction | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-040724-8 | Predicted to act upstream of or within signal transduction. Predicted to be located in membrane. Predicted to be integral component of membrane. |
| ensembl_id | ENSDART00000139910 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00044856 | lncRNA | upstream | 715199 | 32577050 ~ 32579434 (+) | True | XLOC_021815 |
| TCONS_00044677 | lncRNA | upstream | 731819 | 32562610 ~ 32562814 (+) | True | XLOC_021814 |
| TCONS_00044855 | lncRNA | upstream | 806907 | 32480330 ~ 32487726 (+) | True | XLOC_021812 |
| TCONS_00043257 | lncRNA | upstream | 884706 | 32406356 ~ 32409927 (+) | False | XLOC_021810 |
| TCONS_00043252 | lncRNA | upstream | 896789 | 32392520 ~ 32397844 (+) | False | XLOC_021809 |
| TCONS_00044857 | lncRNA | downstream | 145978 | 33455563 ~ 33459265 (+) | True | XLOC_021820 |
| TCONS_00043283 | lncRNA | downstream | 669126 | 33978711 ~ 33983432 (+) | True | XLOC_021831 |
| TCONS_00043285 | lncRNA | downstream | 677870 | 33987455 ~ 33991280 (+) | False | XLOC_021832 |
| TCONS_00043291 | lncRNA | downstream | 729809 | 34039394 ~ 34043302 (+) | True | XLOC_021834 |
| TCONS_00044859 | lncRNA | downstream | 737831 | 34047416 ~ 34185014 (+) | False | XLOC_021835 |
| TCONS_00043263 | mRNA | upstream | 762021 | 32499916 ~ 32532612 (+) | True | XLOC_021813 |
| TCONS_00043262 | mRNA | upstream | 859700 | 32426954 ~ 32434933 (+) | True | XLOC_021811 |
| TCONS_00043261 | mRNA | upstream | 864515 | 32426954 ~ 32430118 (+) | False | XLOC_021811 |
| TCONS_00043256 | mRNA | upstream | 884705 | 32406009 ~ 32409928 (+) | False | XLOC_021810 |
| TCONS_00043269 | mRNA | downstream | 73998 | 33383583 ~ 33444055 (+) | False | XLOC_021819 |
| TCONS_00043270 | mRNA | downstream | 104219 | 33413804 ~ 33444055 (+) | True | XLOC_021819 |
| TCONS_00043272 | mRNA | downstream | 409017 | 33718602 ~ 33729552 (+) | True | XLOC_021822 |
| TCONS_00043273 | mRNA | downstream | 442690 | 33752275 ~ 33757742 (+) | True | XLOC_021823 |
| TCONS_00043275 | mRNA | downstream | 467934 | 33777519 ~ 33901337 (+) | True | XLOC_021825 |
| TCONS_00043265 | other | upstream | 4272 | 33290273 ~ 33290361 (+) | True | XLOC_021817 |
| TCONS_00043264 | other | upstream | 175509 | 33119010 ~ 33119124 (+) | True | XLOC_021816 |
| TCONS_00043260 | other | upstream | 872883 | 32412534 ~ 32421750 (+) | True | XLOC_021809 |
| TCONS_00043259 | other | upstream | 884706 | 32407195 ~ 32409927 (+) | True | XLOC_021810 |
| TCONS_00043247 | other | upstream | 1187152 | 32101211 ~ 32107481 (+) | False | XLOC_021804 |
| TCONS_00043268 | other | downstream | 71569 | 33381154 ~ 33420840 (+) | False | XLOC_021819 |
| TCONS_00043271 | other | downstream | 228466 | 33538051 ~ 33538169 (+) | True | XLOC_021821 |
| TCONS_00043274 | other | downstream | 450162 | 33759747 ~ 33760665 (+) | True | XLOC_021824 |
| TCONS_00043276 | other | downstream | 519080 | 33828665 ~ 33830190 (+) | True | XLOC_021826 |
| TCONS_00043288 | other | downstream | 693172 | 34002757 ~ 34002873 (+) | True | XLOC_021833 |
