Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036943366.1 |
| length | 4914 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 16 |
| gene id | LOC110487786 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 33499100 ~ 33753408 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1414630 | lncRNA | downstream | 25591 | 33410599 ~ 33473509 (-) | False | G1239506 |
| TU1414631 | lncRNA | downstream | 25591 | 33410599 ~ 33473509 (-) | False | G1239506 |
| TU1414634 | lncRNA | downstream | 48314 | 33410599 ~ 33450786 (-) | True | G1239506 |
| TU1414633 | lncRNA | downstream | 85733 | 33410599 ~ 33413367 (-) | False | G1239506 |
| TU1414270 | lncRNA | downstream | 157971 | 33202394 ~ 33341129 (-) | True | LOC110515721 |
| TU1415443 | lncRNA | upstream | 156250 | 33909652 ~ 33960808 (-) | True | G1240176 |
| TU1415487 | lncRNA | upstream | 231831 | 33985233 ~ 33985487 (-) | True | G1240215 |
| TU1415488 | lncRNA | upstream | 232087 | 33985489 ~ 33985704 (-) | True | G1240216 |
| TU1415491 | lncRNA | upstream | 233474 | 33986876 ~ 33987185 (-) | True | G1240219 |
| TU1415504 | lncRNA | upstream | 249675 | 34003077 ~ 34003346 (-) | True | G1240229 |
| XM_036943365.1 | mRNA | downstream | 157780 | 32890968 ~ 33341320 (-) | False | LOC110515721 |
| XM_036943363.1 | mRNA | downstream | 157782 | 32890970 ~ 33341318 (-) | False | LOC110515721 |
| XM_036943364.1 | mRNA | downstream | 157782 | 32890970 ~ 33341318 (-) | False | LOC110515721 |
| XM_036943361.1 | mRNA | downstream | 629653 | 32859018 ~ 32869447 (-) | False | pcdh20 |
| XM_021561771.2 | mRNA | downstream | 633306 | 32859019 ~ 32865794 (-) | True | pcdh20 |
| NM_001165135.2 | mRNA | upstream | 268133 | 34021535 ~ 34025654 (-) | True | LOC100305231 |
| XM_036943369.1 | mRNA | upstream | 273608 | 34027010 ~ 34071574 (-) | False | sh3rf2 |
| XM_036943370.1 | mRNA | upstream | 273609 | 34027011 ~ 34045768 (-) | True | sh3rf2 |
| XM_036943371.1 | mRNA | upstream | 381213 | 34134615 ~ 34168443 (-) | False | LOC110489168 |
| NM_001124387.1 | mRNA | upstream | 502384 | 34255786 ~ 34263746 (-) | False | n4wbp5 |
| TU1414140 | other | downstream | 802698 | 32695876 ~ 32696402 (-) | True | G1239090 |
| TU1414117 | other | downstream | 920153 | 32577297 ~ 32578947 (-) | False | LOC110489150 |
| TU1413314 | other | downstream | 1069125 | 32427992 ~ 32429975 (-) | False | G1238363 |
| TU1413284 | other | downstream | 1098200 | 32400413 ~ 32400900 (-) | True | G1238347 |
| TU1413278 | other | downstream | 1099921 | 32396761 ~ 32399179 (-) | True | G1238344 |
| TU1415639 | other | upstream | 535180 | 34288582 ~ 34292170 (-) | True | LOC110489172 |
| TU1415705 | other | upstream | 584421 | 34337823 ~ 34342891 (-) | True | G1240399 |
| TU1415856 | other | upstream | 888090 | 34641492 ~ 34642037 (-) | False | G1240533 |
| TU1415854 | other | upstream | 888100 | 34641502 ~ 34642037 (-) | False | G1240533 |
| TU1415855 | other | upstream | 888100 | 34641502 ~ 34642037 (-) | False | G1240533 |
