Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036943391.1 |
| length | 1628 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 11 |
| gene id | LOC110487787 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 34586666 ~ 34618931 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|---|
| K23500 | SFXN1_3; sideroflexin-1/3 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1415831 | lncRNA | downstream | 23123 | 34562996 ~ 34563544 (-) | True | G1240515 |
| TU1415824 | lncRNA | downstream | 38579 | 34547859 ~ 34548088 (-) | True | G1240508 |
| TU1415821 | lncRNA | downstream | 49951 | 34536349 ~ 34536716 (-) | True | G1240505 |
| TU1415819 | lncRNA | downstream | 51261 | 34535196 ~ 34535406 (-) | True | G1240503 |
| TU1415807 | lncRNA | downstream | 76468 | 34509815 ~ 34510199 (-) | True | G1240491 |
| TU1415857 | lncRNA | upstream | 30665 | 34641502 ~ 34642037 (-) | True | G1240533 |
| TU1415860 | lncRNA | upstream | 34063 | 34644900 ~ 34645191 (-) | True | G1240535 |
| TU1415862 | lncRNA | upstream | 38959 | 34649796 ~ 34650466 (-) | True | G1240537 |
| TU1415864 | lncRNA | upstream | 42724 | 34653561 ~ 34653889 (-) | True | G1240539 |
| TU1415868 | lncRNA | upstream | 43612 | 34654449 ~ 34655165 (-) | False | G1240541 |
| XR_005035988.1 | mRNA | downstream | 143710 | 34442340 ~ 34442957 (-) | False | LOC118938726 |
| XM_021561775.2 | mRNA | downstream | 288997 | 34294193 ~ 34297670 (-) | True | LOC110489166 |
| XM_021561786.2 | mRNA | downstream | 294422 | 34288582 ~ 34292245 (-) | False | LOC110489172 |
| XM_021561787.2 | mRNA | downstream | 294592 | 34288581 ~ 34292075 (-) | False | LOC110489172 |
| XM_036943374.1 | mRNA | downstream | 299601 | 34269309 ~ 34287066 (-) | True | LOC110487784 |
| XM_021561790.2 | mRNA | upstream | 11793 | 34622630 ~ 34627670 (-) | True | LOC110489177 |
| XM_036943400.1 | mRNA | upstream | 272554 | 34883391 ~ 34904798 (-) | False | ccdc69 |
| XM_036943399.1 | mRNA | upstream | 272554 | 34883391 ~ 34904800 (-) | False | ccdc69 |
| XR_005035990.1 | mRNA | upstream | 286839 | 34897676 ~ 34900540 (-) | True | LOC118938728 |
| XM_021561850.2 | mRNA | upstream | 303223 | 34914060 ~ 34921098 (-) | True | gm2a |
| TU1415705 | other | downstream | 243776 | 34337823 ~ 34342891 (-) | True | G1240399 |
| TU1415639 | other | downstream | 294497 | 34288582 ~ 34292170 (-) | True | LOC110489172 |
| TU1414140 | other | downstream | 1890265 | 32695876 ~ 32696402 (-) | True | G1239090 |
| TU1414117 | other | downstream | 2007720 | 32577297 ~ 32578947 (-) | False | LOC110489150 |
| TU1413314 | other | downstream | 2156692 | 32427992 ~ 32429975 (-) | False | G1238363 |
| TU1415856 | other | upstream | 30655 | 34641492 ~ 34642037 (-) | False | G1240533 |
| TU1415854 | other | upstream | 30665 | 34641502 ~ 34642037 (-) | False | G1240533 |
| TU1415855 | other | upstream | 30665 | 34641502 ~ 34642037 (-) | False | G1240533 |
| TU1415859 | other | upstream | 32298 | 34643135 ~ 34644152 (-) | True | G1240534 |
| TU1416350 | other | upstream | 451086 | 35061923 ~ 35062319 (-) | True | G1240963 |
