Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1380148 |
| length | 626 |
| lncRNA type | intronic |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G1208516 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 5316934 ~ 5317603 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1379964 | lncRNA | downstream | 275942 | 4982333 ~ 5040992 (-) | False | LOC110488599 |
| TU1379960 | lncRNA | downstream | 328121 | 4983401 ~ 4988813 (-) | False | LOC110488599 |
| TU1379961 | lncRNA | downstream | 328121 | 4983401 ~ 4988813 (-) | False | LOC110488599 |
| TU1379946 | lncRNA | downstream | 396241 | 4920490 ~ 4920693 (-) | True | G1208324 |
| TU1379943 | lncRNA | downstream | 399760 | 4916934 ~ 4917174 (-) | True | G1208321 |
| TU1380238 | lncRNA | upstream | 130769 | 5448372 ~ 5509385 (-) | True | G1208595 |
| TU1380224 | lncRNA | upstream | 171027 | 5488630 ~ 5496282 (-) | False | G1208584 |
| TU1380225 | lncRNA | upstream | 171027 | 5488630 ~ 5496199 (-) | False | G1208584 |
| TU1380220 | lncRNA | upstream | 171146 | 5488749 ~ 5496199 (-) | False | G1208584 |
| TU1380223 | lncRNA | upstream | 171146 | 5488749 ~ 5496199 (-) | True | G1208584 |
| XM_021560870.2 | mRNA | downstream | 100699 | 5205032 ~ 5216235 (-) | False | LOC110488600 |
| XM_021560871.2 | mRNA | downstream | 106263 | 5205047 ~ 5210671 (-) | True | LOC110488600 |
| XM_036942730.1 | mRNA | downstream | 118547 | 4984486 ~ 5198387 (-) | False | LOC110488599 |
| XM_036942733.1 | mRNA | downstream | 118547 | 4984486 ~ 5198387 (-) | False | LOC110488599 |
| XM_036942731.1 | mRNA | downstream | 118547 | 4984494 ~ 5198387 (-) | False | LOC110488599 |
| XM_021560875.2 | mRNA | upstream | 83964 | 5401567 ~ 5439379 (-) | False | LOC110488604 |
| XM_021560874.2 | mRNA | upstream | 83964 | 5401567 ~ 5439585 (-) | False | LOC110488604 |
| XM_021560877.2 | mRNA | upstream | 83964 | 5401567 ~ 5439585 (-) | False | LOC110488604 |
| XM_021560878.2 | mRNA | upstream | 83964 | 5401567 ~ 5439586 (-) | False | LOC110488604 |
| XM_021560876.2 | mRNA | upstream | 83964 | 5401567 ~ 5439587 (-) | True | LOC110488604 |
| TU1379962 | other | downstream | 118730 | 5055325 ~ 5198204 (-) | True | LOC110488599 |
| TU1378471 | other | downstream | 1090965 | 4225039 ~ 4225969 (-) | True | G1206939 |
| TU1377880 | other | downstream | 1582988 | 3728495 ~ 3733946 (-) | False | LOC110488575 |
| TU1377849 | other | downstream | 1704641 | 3610803 ~ 3612293 (-) | True | G1206357 |
| TU1377765 | other | downstream | 1849265 | 3467063 ~ 3467669 (-) | True | G1206291 |
| TU1380301 | other | upstream | 223576 | 5541179 ~ 5542471 (-) | True | LOC110489463 |
| TU1380482 | other | upstream | 548719 | 5866322 ~ 5866950 (-) | True | G1208831 |
| TU1380963 | other | upstream | 821757 | 6139360 ~ 6140037 (-) | True | G1209268 |
| TU1380970 | other | upstream | 828343 | 6145946 ~ 6150661 (-) | False | G1209275 |
| TU1380971 | other | upstream | 830090 | 6147693 ~ 6150661 (-) | True | G1209275 |
