Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1388587 |
| length | 256 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 1 |
| gene id | G1216064 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 12516343 ~ 12516598 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1388560 | lncRNA | downstream | 19674 | 12496349 ~ 12496669 (-) | True | G1216037 |
| TU1388512 | lncRNA | downstream | 56605 | 12459516 ~ 12459738 (-) | True | G1215989 |
| TU1388511 | lncRNA | downstream | 57667 | 12458463 ~ 12458676 (-) | True | G1215988 |
| TU1388474 | lncRNA | downstream | 90557 | 12425582 ~ 12425786 (-) | True | G1215951 |
| TU1388466 | lncRNA | downstream | 94421 | 12421723 ~ 12421922 (-) | True | G1215943 |
| TU1388716 | lncRNA | upstream | 20495 | 12537093 ~ 12537306 (-) | True | G1216188 |
| TU1388731 | lncRNA | upstream | 54393 | 12570991 ~ 12571227 (-) | True | G1216203 |
| TU1388734 | lncRNA | upstream | 56751 | 12573349 ~ 12573635 (-) | True | G1216206 |
| TU1388755 | lncRNA | upstream | 87795 | 12604393 ~ 12604679 (-) | True | G1216218 |
| TU1388819 | lncRNA | upstream | 180046 | 12696644 ~ 12696848 (-) | True | G1216281 |
| XM_036942959.1 | mRNA | downstream | 239603 | 12258512 ~ 12276740 (-) | False | LOC110488809 |
| XM_036942960.1 | mRNA | downstream | 239603 | 12264460 ~ 12276740 (-) | True | LOC110488809 |
| XM_036942958.1 | mRNA | downstream | 239605 | 12258512 ~ 12276738 (-) | False | LOC110488809 |
| XM_036942957.1 | mRNA | downstream | 239606 | 12258512 ~ 12276737 (-) | False | LOC110488809 |
| XR_005035928.1 | mRNA | downstream | 532842 | 11953379 ~ 11983501 (-) | True | LOC118938696 |
| XM_021561217.2 | mRNA | upstream | 47313 | 12563911 ~ 12568719 (-) | False | LOC110488811 |
| XM_036942961.1 | mRNA | upstream | 71476 | 12588074 ~ 12669699 (-) | True | LOC110488815 |
| LOC110488813 | mRNA | upstream | 175368 | 12691966 ~ 12696606 (-) | True | LOC110488813 |
| XM_036942962.1 | mRNA | upstream | 196450 | 12713048 ~ 12737488 (-) | True | LOC110488814 |
| XM_021561221.2 | mRNA | upstream | 242568 | 12759166 ~ 12792580 (-) | True | LOC110488816 |
| TU1388536 | other | downstream | 37876 | 12478019 ~ 12478467 (-) | True | G1216013 |
| TU1387944 | other | downstream | 539566 | 11964493 ~ 11976777 (-) | True | G1215447 |
| TU1387839 | other | downstream | 619542 | 11894022 ~ 11896801 (-) | True | G1215349 |
| TU1387465 | other | downstream | 940636 | 11574807 ~ 11575707 (-) | True | G1214997 |
| TU1387274 | other | downstream | 1123038 | 11392008 ~ 11393305 (-) | True | LOC110488801 |
| TU1388712 | other | upstream | 47327 | 12563925 ~ 12568665 (-) | True | LOC110488811 |
| TU1388924 | other | upstream | 307048 | 12823646 ~ 12828652 (-) | True | LOC110488817 |
| TU1389002 | other | upstream | 324898 | 12841496 ~ 12842753 (-) | True | G1216443 |
| TU1390042 | other | upstream | 1167186 | 13683784 ~ 13711668 (-) | False | LOC110488853 |
| TU1390045 | other | upstream | 1188665 | 13705263 ~ 13714877 (-) | True | LOC110488853 |
