Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1398177 |
| length | 203 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G1224958 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 19677749 ~ 19677951 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1398168 | lncRNA | downstream | 6700 | 19670584 ~ 19671049 (-) | True | G1224950 |
| TU1398150 | lncRNA | downstream | 25777 | 19651160 ~ 19651972 (-) | True | G1224932 |
| TU1398148 | lncRNA | downstream | 27771 | 19649126 ~ 19649978 (-) | True | G1224930 |
| TU1397757 | lncRNA | downstream | 158383 | 19519079 ~ 19519366 (-) | True | G1224564 |
| TU1397740 | lncRNA | downstream | 170540 | 19507009 ~ 19507209 (-) | True | G1224547 |
| TU1398180 | lncRNA | upstream | 7865 | 19685816 ~ 19686103 (-) | True | G1224961 |
| TU1398187 | lncRNA | upstream | 18131 | 19696082 ~ 19696450 (-) | True | G1224968 |
| TU1398188 | lncRNA | upstream | 19068 | 19697019 ~ 19697383 (-) | True | G1224969 |
| TU1398234 | lncRNA | upstream | 99051 | 19777002 ~ 19777276 (-) | True | G1225011 |
| TU1398273 | lncRNA | upstream | 138352 | 19816303 ~ 19816593 (-) | True | G1225034 |
| XM_036943114.1 | mRNA | downstream | 248704 | 19283198 ~ 19429045 (-) | True | limch1b |
| XM_036943110.1 | mRNA | downstream | 248706 | 19283198 ~ 19429043 (-) | False | limch1b |
| XM_036943111.1 | mRNA | downstream | 248706 | 19283198 ~ 19429043 (-) | False | limch1b |
| XM_036943113.1 | mRNA | downstream | 248707 | 19283198 ~ 19429042 (-) | False | limch1b |
| XM_036943117.1 | mRNA | upstream | 43009 | 19720960 ~ 19722934 (-) | True | LOC118938704 |
| XM_021561450.2 | mRNA | upstream | 60256 | 19738207 ~ 19753042 (-) | False | LOC110488956 |
| XM_036943118.1 | mRNA | upstream | 64129 | 19742080 ~ 19753370 (-) | False | LOC110488956 |
| XM_036943120.1 | mRNA | upstream | 64129 | 19742080 ~ 19753790 (-) | False | LOC110488956 |
| XM_036943121.1 | mRNA | upstream | 64129 | 19742080 ~ 19753902 (-) | False | LOC110488956 |
| TU1394921 | other | downstream | 2278514 | 17398341 ~ 17399235 (-) | True | asb5a |
| TU1391998 | other | downstream | 4359589 | 15317793 ~ 15318160 (-) | True | G1219208 |
| TU1391564 | other | downstream | 4683370 | 14993820 ~ 14994379 (-) | True | G1218808 |
| TU1391105 | other | downstream | 5120368 | 14556833 ~ 14557381 (-) | True | LOC110488886 |
| TU1390045 | other | downstream | 5962872 | 13705263 ~ 13714877 (-) | True | LOC110488853 |
| TU1398282 | other | upstream | 157927 | 19835878 ~ 19836319 (-) | True | G1225043 |
| TU1398774 | other | upstream | 455760 | 20133711 ~ 20134053 (-) | True | G1225499 |
| TU1398810 | other | upstream | 643827 | 20321778 ~ 20325219 (-) | True | G1225505 |
| TU1398964 | other | upstream | 787779 | 20465730 ~ 20470523 (-) | True | G1225647 |
| TU1399197 | other | upstream | 1045086 | 20723037 ~ 20723236 (-) | True | G1225875 |
