Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1398884 |
| length | 276 |
| lncRNA type | antisense_over |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G1225575 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 20274997 ~ 20275272 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1398822 | lncRNA | downstream | 14184 | 20258534 ~ 20260813 (-) | True | G1225517 |
| TU1398817 | lncRNA | downstream | 35910 | 20237512 ~ 20239087 (-) | True | G1225512 |
| TU1398880 | lncRNA | downstream | 38211 | 20236543 ~ 20236786 (-) | True | G1225571 |
| TU1398875 | lncRNA | downstream | 45473 | 20229014 ~ 20229524 (-) | True | G1225567 |
| TU1398873 | lncRNA | downstream | 48668 | 20225700 ~ 20226329 (-) | True | G1225565 |
| TU1398885 | lncRNA | upstream | 757 | 20276029 ~ 20276271 (-) | True | G1225576 |
| TU1398819 | lncRNA | upstream | 2261 | 20277533 ~ 20308964 (-) | True | G1225514 |
| TU1398891 | lncRNA | upstream | 11567 | 20286839 ~ 20287609 (-) | True | G1225582 |
| TU1398894 | lncRNA | upstream | 14550 | 20289822 ~ 20290999 (-) | False | G1225584 |
| TU1398893 | lncRNA | upstream | 15069 | 20290341 ~ 20290999 (-) | True | G1225584 |
| XM_021561468.2 | mRNA | downstream | 1348 | 20265984 ~ 20273649 (-) | False | LOC110488967 |
| XR_005035953.1 | mRNA | downstream | 1348 | 20265984 ~ 20273649 (-) | True | LOC110488967 |
| NM_001160677.1 | mRNA | downstream | 59489 | 20206253 ~ 20215508 (-) | True | mcts1 |
| XM_036943128.1 | mRNA | downstream | 109935 | 20135179 ~ 20165062 (-) | False | LOC110488962 |
| XM_036943129.1 | mRNA | downstream | 109935 | 20135179 ~ 20165062 (-) | False | LOC110488962 |
| XM_021561474.2 | mRNA | upstream | 29102 | 20304374 ~ 20308443 (-) | True | zbtb33 |
| XM_036942651.1 | mRNA | upstream | 40357 | 20315629 ~ 20316614 (-) | False | ndufa1 |
| NM_001160667.2 | mRNA | upstream | 40363 | 20315635 ~ 20316316 (-) | False | ndufa1 |
| XM_021561476.2 | mRNA | upstream | 51454 | 20326726 ~ 20330080 (-) | False | sowahd |
| XM_036943135.1 | mRNA | upstream | 51454 | 20326726 ~ 20331372 (-) | False | sowahd |
| TU1398774 | other | downstream | 140944 | 20133711 ~ 20134053 (-) | True | G1225499 |
| TU1398282 | other | downstream | 438678 | 19835878 ~ 19836319 (-) | True | G1225043 |
| TU1394921 | other | downstream | 2875762 | 17398341 ~ 17399235 (-) | True | asb5a |
| TU1391998 | other | downstream | 4956837 | 15317793 ~ 15318160 (-) | True | G1219208 |
| TU1391564 | other | downstream | 5280618 | 14993820 ~ 14994379 (-) | True | G1218808 |
| TU1398810 | other | upstream | 46506 | 20321778 ~ 20325219 (-) | True | G1225505 |
| TU1398964 | other | upstream | 190458 | 20465730 ~ 20470523 (-) | True | G1225647 |
| TU1399197 | other | upstream | 447765 | 20723037 ~ 20723236 (-) | True | G1225875 |
| TU1401215 | other | upstream | 1953047 | 22228319 ~ 22233291 (-) | True | LOC110488986 |
| TU1403347 | other | upstream | 3594686 | 23869958 ~ 23873564 (-) | True | G1229693 |
