Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1402443 |
| length | 349 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G1228890 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 23582244 ~ 23582592 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
23,579,600
23,580,000
23,580,400
23,580,800
23,581,200
23,581,600
23,582,000
23,582,400
23,582,800
23,583,200
23,583,600
23,584,000
NC_048578.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1402408 | lncRNA | upstream | 48091 | 23533233 ~ 23534153 (+) | True | G1228860 |
| TU1402380 | lncRNA | upstream | 63776 | 23515067 ~ 23518468 (+) | True | G1228836 |
| TU1402392 | lncRNA | upstream | 81921 | 23499756 ~ 23500323 (+) | False | G1228847 |
| TU1402393 | lncRNA | upstream | 81921 | 23499804 ~ 23500323 (+) | True | G1228847 |
| TU1402394 | lncRNA | upstream | 83450 | 23498071 ~ 23498794 (+) | True | G1228848 |
| TU1402446 | lncRNA | downstream | 9719 | 23592311 ~ 23592535 (+) | True | G1228893 |
| TU1402448 | lncRNA | downstream | 11047 | 23593639 ~ 23593899 (+) | True | G1228895 |
| TU1402450 | lncRNA | downstream | 13325 | 23595917 ~ 23598010 (+) | True | G1228897 |
| TU1402452 | lncRNA | downstream | 25683 | 23608275 ~ 23608677 (+) | True | G1228899 |
| TU1402453 | lncRNA | downstream | 26165 | 23608757 ~ 23609342 (+) | True | G1228900 |
| XR_005035956.1 | mRNA | upstream | 8267 | 23572973 ~ 23573977 (+) | True | LOC118938707 |
| XM_021561530.2 | mRNA | upstream | 260587 | 23314948 ~ 23321657 (+) | False | ky |
| XM_021561529.2 | mRNA | upstream | 260587 | 23314993 ~ 23321657 (+) | True | ky |
| XM_036943160.1 | mRNA | upstream | 325875 | 22901758 ~ 23256369 (+) | False | LOC110487749 |
| XM_036943159.1 | mRNA | upstream | 325881 | 23154862 ~ 23256363 (+) | True | LOC110487749 |
| XM_021561539.2 | mRNA | downstream | 34121 | 23616713 ~ 23622863 (+) | False | shisa3 |
| XM_021561544.2 | mRNA | downstream | 242782 | 23825374 ~ 23830234 (+) | True | grxcr1a |
| XM_021561549.2 | mRNA | downstream | 285976 | 23868568 ~ 23873598 (+) | False | LOC110489012 |
| XM_036943169.1 | mRNA | downstream | 287142 | 23869734 ~ 23873598 (+) | True | LOC110489012 |
| XM_036943178.1 | mRNA | downstream | 817891 | 24400483 ~ 24439204 (+) | True | LOC110489017 |
| TU1401977 | other | upstream | 728583 | 22853315 ~ 22853661 (+) | True | G1228466 |
| TU1399161 | other | upstream | 2886107 | 20695672 ~ 20696137 (+) | True | G1225840 |
| TU1398501 | other | upstream | 3268134 | 20308619 ~ 20314110 (+) | True | LOC110488973 |
| TU1398416 | other | upstream | 3569767 | 20012015 ~ 20012477 (+) | True | G1225174 |
| TU1398415 | other | upstream | 3570711 | 20011030 ~ 20011533 (+) | True | G1225173 |
| TU1402466 | other | downstream | 34131 | 23616723 ~ 23621248 (+) | False | shisa3 |
| TU1402464 | other | downstream | 34265 | 23616857 ~ 23621248 (+) | False | shisa3 |
| TU1403926 | other | downstream | 865708 | 24448300 ~ 24455897 (+) | False | LOC110489020 |
| TU1403927 | other | downstream | 865981 | 24448573 ~ 24455897 (+) | False | LOC110489020 |
| TU1403929 | other | downstream | 865981 | 24448573 ~ 24455897 (+) | False | LOC110489020 |
