Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1404530 |
| length | 303 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G1230781 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048578.1 |
| NCBI id | CM023232.3 |
| chromosome length | 43310081 |
| location | 24918714 ~ 24919016 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1404404 | lncRNA | downstream | 161114 | 24712666 ~ 24757600 (-) | True | G1230669 |
| TU1404335 | lncRNA | downstream | 203242 | 24606138 ~ 24715472 (-) | True | G1230609 |
| TU1404307 | lncRNA | downstream | 236699 | 24599526 ~ 24682015 (-) | True | LOC110489029 |
| TU1404305 | lncRNA | downstream | 246767 | 24671343 ~ 24671947 (-) | True | G1230580 |
| TU1404333 | lncRNA | downstream | 304218 | 24603554 ~ 24614496 (-) | True | G1230607 |
| TU1404588 | lncRNA | upstream | 27456 | 24946472 ~ 24999719 (-) | True | G1230836 |
| TU1404616 | lncRNA | upstream | 62950 | 24981966 ~ 24985703 (-) | True | G1230863 |
| TU1404586 | lncRNA | upstream | 69596 | 24988612 ~ 25003124 (-) | False | G1230835 |
| TU1404587 | lncRNA | upstream | 69596 | 24988612 ~ 24994210 (-) | True | G1230835 |
| TU1404627 | lncRNA | upstream | 89450 | 25008466 ~ 25008740 (-) | True | G1230874 |
| XM_021559665.2 | mRNA | downstream | 12307 | 24904552 ~ 24906407 (-) | True | LOC110487758 |
| XM_021561579.2 | mRNA | downstream | 45048 | 24871941 ~ 24873666 (-) | True | LOC110489031 |
| LOC118938708 | mRNA | downstream | 54226 | 24862944 ~ 24864488 (-) | True | LOC118938708 |
| XM_021562175.2 | mRNA | downstream | 209443 | 24706395 ~ 24709271 (-) | False | LOC110489477 |
| XR_002468511.2 | mRNA | downstream | 237287 | 24599699 ~ 24681427 (-) | False | LOC110489029 |
| XM_036943634.1 | mRNA | upstream | 615055 | 25534071 ~ 25534394 (-) | True | LOC118938754 |
| XM_021561580.2 | mRNA | upstream | 678355 | 25597371 ~ 25976803 (-) | False | LOC110489032 |
| XM_036943184.1 | mRNA | upstream | 678355 | 25597371 ~ 25979494 (-) | False | LOC110489032 |
| XM_036943185.1 | mRNA | upstream | 739481 | 25658497 ~ 25976797 (-) | True | LOC110489032 |
| XR_005035959.1 | mRNA | upstream | 1651178 | 26570194 ~ 26586161 (-) | True | LOC118938709 |
| TU1404397 | other | downstream | 209407 | 24707961 ~ 24709307 (-) | True | LOC110489477 |
| TU1404303 | other | downstream | 356852 | 24556733 ~ 24561862 (-) | True | LOC110489025 |
| TU1403347 | other | downstream | 1045150 | 23869958 ~ 23873564 (-) | True | G1229693 |
| TU1401215 | other | downstream | 2685423 | 22228319 ~ 22233291 (-) | True | LOC110488986 |
| TU1399197 | other | downstream | 4195478 | 20723037 ~ 20723236 (-) | True | G1225875 |
| TU1406122 | other | upstream | 1184330 | 26103346 ~ 26162772 (-) | False | G1232240 |
| TU1406154 | other | upstream | 1185076 | 26104092 ~ 26165403 (-) | False | G1232240 |
| TU1406145 | other | upstream | 1185521 | 26104537 ~ 26123887 (-) | False | G1232240 |
| TU1406141 | other | upstream | 1203814 | 26122830 ~ 26157591 (-) | False | G1232240 |
| TU1406144 | other | upstream | 1203814 | 26122830 ~ 26165298 (-) | False | G1232240 |
