Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1439729 |
| length | 1831 |
| RNA type | TUCP |
| GC content | 0.46 |
| exon number | 5 |
| gene id | LOC110489604 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 13288725 ~ 13369504 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1439771 | lncRNA | downstream | 44863 | 13296505 ~ 13297190 (-) | True | G1260154 |
| TU1439728 | lncRNA | downstream | 46668 | 13288728 ~ 13295385 (-) | False | LOC110489604 |
| TU1439781 | lncRNA | downstream | 49904 | 13291411 ~ 13292149 (-) | True | G1260164 |
| TU1439170 | lncRNA | downstream | 107850 | 13233693 ~ 13234203 (-) | True | G1259721 |
| TU1439151 | lncRNA | downstream | 149271 | 13192561 ~ 13192782 (-) | True | G1259709 |
| TU1439812 | lncRNA | upstream | 10417 | 13371195 ~ 13414889 (-) | True | G1260192 |
| TU1439745 | lncRNA | upstream | 38679 | 13399457 ~ 13405025 (-) | True | G1260142 |
| TU1439832 | lncRNA | upstream | 44832 | 13405610 ~ 13406205 (-) | True | G1260207 |
| TU1439834 | lncRNA | upstream | 62286 | 13423064 ~ 13423444 (-) | True | G1260209 |
| TU1439837 | lncRNA | upstream | 72682 | 13433460 ~ 13434219 (-) | True | G1260211 |
| XM_021562209.2 | mRNA | downstream | 109132 | 13228122 ~ 13232921 (-) | False | commd3 |
| NM_001165062.2 | mRNA | downstream | 109170 | 13228125 ~ 13232883 (-) | True | commd3 |
| XM_021562339.2 | mRNA | downstream | 114640 | 13219351 ~ 13227413 (-) | True | LOC110489603 |
| XM_021562338.2 | mRNA | downstream | 117993 | 13219351 ~ 13224060 (-) | False | LOC110489603 |
| XM_036943722.1 | mRNA | downstream | 128402 | 13203205 ~ 13213651 (-) | True | LOC110490912 |
| LOC118938788 | mRNA | upstream | 38675 | 13399453 ~ 13400920 (-) | True | LOC118938788 |
| XM_036943734.1 | mRNA | upstream | 41315 | 13402093 ~ 13452042 (-) | False | LOC110515851 |
| XM_036943732.1 | mRNA | upstream | 41315 | 13402093 ~ 13452046 (-) | False | LOC110515851 |
| XM_036943733.1 | mRNA | upstream | 41315 | 13402093 ~ 13452046 (-) | True | LOC110515851 |
| XM_036943739.1 | mRNA | upstream | 157717 | 13518495 ~ 13527313 (-) | False | zgc:194621 |
| TU1438430 | other | downstream | 808665 | 12510872 ~ 12533388 (-) | False | LOC110489593 |
| TU1438431 | other | downstream | 808665 | 12511483 ~ 12533388 (-) | True | LOC110489593 |
| TU1436701 | other | downstream | 2523142 | 10818443 ~ 10818911 (-) | True | G1257642 |
| TU1435807 | other | downstream | 3046063 | 10287673 ~ 10295990 (-) | True | LOC110489570 |
| TU1435537 | other | downstream | 3467311 | 9873519 ~ 9874742 (-) | True | G1256654 |
| TU1439823 | other | upstream | 25611 | 13386389 ~ 13387587 (-) | True | G1260199 |
| TU1439858 | other | upstream | 102087 | 13462865 ~ 13505161 (-) | True | G1260226 |
| TU1439899 | other | upstream | 176292 | 13537070 ~ 13538208 (-) | True | G1260265 |
| TU1439981 | other | upstream | 347235 | 13708013 ~ 13710835 (-) | False | msl2b |
| TU1439980 | other | upstream | 348818 | 13709596 ~ 13710835 (-) | False | msl2b |
