RNA id: NM_001124286.1


Basic Information

Item Value
RNA id NM_001124286.1
length 1013
RNA type mRNA
GC content 0.44
exon number 2
gene id LOC100135941
representative True

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 15761444 ~ 15762978 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TTTGAAGAACTCCTTATACACATTTCTTGATCCATCACTCGTGGAAGAGGAAGAGAGTTCTCAACAAATACCTAAAATCCAGGGACACAACGACTCAACTGAAGATCTCGTTGAACCCCTGACATGAAGCTCAATTTCCTCGTCACCACCGTGGTTCTGCTCATTGCTTTCTTACCGCGCTATGAGTGTAGGGCTATCGAGAGCCCTGGCGCTGTCCAGCGCGCCACCGCTCCACATCACGACGCGCAGCAACAGTCTCTTCCCCTCCTGACGCGACATGGAGAGGAATACTACATCCGACTGGGAAACGGGAACCGCAACTCTGTTGCGTCCGCACCTGAAGGCATGTACCCAGAGGGCTCCCCAGCGGTCTACAACAGAGCCTTGCAGCTCCAACTGACGCAGCGTCTTCTACAAGGCAAAGTTGGGAACATCAGCCGGTTCGTCAGCGGCTTCGCGAACCAGCTCGACGACTCGattgagagggggaggaggtccgATGATCCGCCGATATCTCTAGATCTTACGTTCCACATGCTCCGACAGATGATGGAGATGTCCAGAGCTGAACAGTTACAGCAACAAGCCCATAGCAACAGAAAAATGATGGAGATCTTCGGGAAATGAAAATTACATCCATCCATCCGCCAAagatttgtttttacatttagcaCAAAACACACAGTATTCTGTACCATAGTGCTGCTTTTCCATCTTTgtttagaattatttattttatagctTTAACCTGACGGTGGAGACTAAATGGGCTTGTAGGTTACTTGTAATTATGATTGTAGCCTATATCATGCAAGATAAAGTATGTCCTTTGAATTTGTAATAGGCTATTGTTGTTGAAGTTCTACGTCAAAACTGTAGAATATACAcgattctgtctctctttcattaagacaaaaacatatttttttggtAGATCTTATAGGCTTAGGAAATTACGTTTTATTGTATGTTATGTTATTTAAGTTTGTTAATAAACTTATGAGCAACGAGTA

Function

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005179 hormone activity molecular_function

KEGG:

id description
K05256 CRH; corticotropin-releasing hormone

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1442497 lncRNA downstream 87296 15672208 ~ 15674148 (-) True LOC110489683
TU1442500 lncRNA downstream 130243 15630893 ~ 15631201 (-) True G1262413
TU1441893 lncRNA downstream 143103 15618093 ~ 15618341 (-) True G1261910
TU1441869 lncRNA downstream 161342 15599836 ~ 15600102 (-) True G1261886
TU1441854 lncRNA downstream 176599 15579910 ~ 15584845 (-) True G1261871
TU1442569 lncRNA upstream 4372 15767350 ~ 15767589 (-) True G1262476
TU1442573 lncRNA upstream 8857 15771835 ~ 15772052 (-) True G1262480
TU1442582 lncRNA upstream 19439 15782417 ~ 15782642 (-) True G1262489
TU1442584 lncRNA upstream 23629 15786607 ~ 15786963 (-) True G1262491
TU1442587 lncRNA upstream 29277 15792255 ~ 15792968 (-) True G1262494
trnay-gua-4 mRNA downstream 12130 15749229 ~ 15749314 (-) True trnay-gua-4
XM_036943860.1 mRNA downstream 26068 15706942 ~ 15735376 (-) True LOC110489684
XM_036943859.1 mRNA downstream 26080 15706942 ~ 15735364 (-) False LOC110489684
XM_036943861.1 mRNA downstream 26080 15706942 ~ 15735364 (-) False LOC110489684
XM_036943862.1 mRNA downstream 26080 15706942 ~ 15735364 (-) False LOC110489684
XM_036943864.1 mRNA upstream 58723 15821701 ~ 15845199 (-) False LOC110489690
XM_036943865.1 mRNA upstream 58723 15821701 ~ 15845199 (-) False LOC110489690
XM_036943866.1 mRNA upstream 58723 15821701 ~ 15845199 (-) False LOC110489690
XR_002468613.2 mRNA upstream 131490 15894468 ~ 15898010 (-) False LOC110489693
XM_021562462.2 mRNA upstream 137502 15900480 ~ 15904068 (-) False LOC110489694
TU1441760 other downstream 255246 15505698 ~ 15506198 (-) True G1261796
TU1441538 other downstream 571628 15189546 ~ 15189816 (-) True G1261602
TU1441452 other downstream 662728 15098040 ~ 15098716 (-) True G1261529
TU1441492 other downstream 682092 15077710 ~ 15079352 (-) False G1261562
TU1442597 other upstream 43272 15806250 ~ 15807617 (-) True G1262503
TU1442531 other upstream 65373 15828351 ~ 15845141 (-) True LOC110489690
TU1442665 other upstream 226308 15989286 ~ 16035122 (-) True LOC110490929
TU1442865 other upstream 513031 16276009 ~ 16276552 (-) True G1262745
TU1443617 other upstream 882666 16645644 ~ 16646417 (-) True G1263444

Expression Profile