RNA id: NM_001190941.1



Basic Information


Item Value
RNA id NM_001190941.1
length 1535
RNA type mRNA
GC content 0.58
exon number 11
gene id actriib
representative True

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 18618670 ~ 18680053 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ATATGTTTGCTTCCTGTCTGACTTTTGCACTTCTGGGAACTTTTTGTGCAGGACCAAGCCATGGAGAGGTGGACACACAGGAGTGCTTGTTCTATAACATCAACTATGAGATTGAGAAGACCAACCAGAGTGGGGTAGAGCGCTGTGAGGGTGAGAAGGACAAGCGGTCGCACTGCTACGCCTCATGGCGAAACAACTCGGGTACCATAGAGCTGGTGAAGAAGGGCTGCTGGCTGGATGACTTCAACTGCTATGACAGGCAAGAATGTGTGGCGACAGAGGAGAATCCTCAGGTGTTCTTCTGTTGCTGCGAGGGGAACTTCTGCAACGAGAGGTTCACTCACCTGCCTGATATCAACGGACCATTGATCAAGTCGCCTCCCCCCATGCCCACACTACTCAATGTGCTGGTCTACTCACTGCTGCCCATCACCATGCTCTCCATGGCCCTGCTGCTGGCCTTCTGGATGTACCGCCACCACAAGCCACCCTATGGCCATGTGGACATCAATGAGGATCCCGGcctcgttctccctccctcccccctggtAGGTCTCAAACCCCTGCAGTTGCTGGAGATTAAGGCCAGGGGGCGCTTTGGCTGTGTGTGGAAGGCCCAGATGATGAACGACTACGTGGCTGTCAAGGTCTTCCCCATTCAGGATAAACAGTCGTGGACGAACGAGCGGGATGTGTTCCTAACACCGGGGATGAAGCACGAGAACCTGCTGCGCTACATCGCCGCCGAGAAGCGCGGGACCAACTTGGAGATGGAGCTGTGGCTCATCTCTGAGTTCCACGAGAGGGGCTCCCTGACGGACTATCTGAAAGGGAATGCAATCAGCTGGACTGAGCTGTGCCACATCGCTGAGACCATGGCCTGCGGGCTGGCCTACCTGCACGAAGACGTGCCTCGCTACAAAGGAGAGGGACCCAAACCGGCCATTGCTCACAGGGACTTCAAGAGTAAGAATGTGATGCTGCGGACGGACCTGACGGCCATCATCGGGGACTTTGGGCTGGCGGTGCGGTTCGAGCCGGGCAAGCCCCCAGGGGACACTCACGGCCAGGTGGGTACCAGGCGCTACATGGCCCCGGAGGTCCTGGAAGGTGCCATCAACTTCCAGCGGGACGCCTTTCTCAGGATAGACATGTACGCCATGGGCCTGGTGCTGTGGGAGCTGGTGTCGCGCTGCAAGGCGGCCGACGGCCCAGTGGATGAGTACATGCTGCCGTTTGAGGAGGAGATCGGCCAGCACCCGTCCCTGGAGGACTTACAGGAGGTGGTGGTCCACAAAAAGATGAGGCCAGTCTTCAAGGACTGCTGGCTCAAACACGCTGGCCTGGAGTCTATGTGTGAGACGATAGAGGAGTGCTGGGACCATGACGCGGAGGCGCGCCTCTCTGCTGGCTGCGTGGAGGAGCGCATCTCGCAGATCCGCCGGCTGACCAGCCCCCCTACCTCGGACTGCCTGGTCTCCATGGTGACCTCTGTCACCAACGTGGACTTGCCACCCAAAGAGTCCAGTATCTGA

Function


GO:

id name namespace
GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway biological_process
GO:0035556 intracellular signal transduction biological_process
GO:0023014 signal transduction by protein phosphorylation biological_process
GO:0006468 protein phosphorylation biological_process
GO:0016020 membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0004702 obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity molecular_function
GO:0005024 transforming growth factor beta-activated receptor activity molecular_function

KEGG:

id description
K13596 ACVR2B; activin receptor type-2B

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1445794 lncRNA downstream 43721 18574667 ~ 18574949 (-) True G1265454
TU1445793 lncRNA downstream 44359 18573550 ~ 18574311 (-) True G1265453
TU1445792 lncRNA downstream 46504 18571945 ~ 18572166 (-) True G1265452
TU1445708 lncRNA downstream 182035 18434983 ~ 18436635 (-) True G1265371
TU1445643 lncRNA downstream 337419 18280730 ~ 18281251 (-) True G1265310
TU1445892 lncRNA upstream 55218 18735271 ~ 18735636 (-) True G1265547
TU1446801 lncRNA upstream 170547 18850600 ~ 18850889 (-) True G1266320
TU1446806 lncRNA upstream 179673 18859726 ~ 18860266 (-) True G1266325
TU1446845 lncRNA upstream 238750 18918803 ~ 18919391 (-) False LOC110490935
TU1446846 lncRNA upstream 238860 18918913 ~ 18919391 (-) False LOC110490935
XM_021562575.2 mRNA downstream 11166 18592996 ~ 18607504 (-) True LOC110489734
XM_021562565.2 mRNA downstream 234564 18373431 ~ 18384106 (-) False LOC110489732
XM_021562566.2 mRNA downstream 234564 18373431 ~ 18384106 (-) False LOC110489732
XM_021562567.2 mRNA downstream 234564 18373431 ~ 18384106 (-) False LOC110489732
XM_021562568.2 mRNA downstream 234564 18373431 ~ 18384106 (-) True LOC110489732
XM_036943979.1 mRNA upstream 106817 18786870 ~ 18848976 (-) False xylb
XM_036943978.1 mRNA upstream 106817 18786870 ~ 18849057 (-) False xylb
XR_005036057.1 mRNA upstream 106817 18786870 ~ 18849057 (-) False xylb
XR_005036058.1 mRNA upstream 126709 18806762 ~ 18849057 (-) False xylb
XR_005036059.1 mRNA upstream 130266 18810319 ~ 18849057 (-) False xylb
TU1445798 other downstream 38507 18576539 ~ 18580163 (-) False G1265456
TU1445799 other downstream 38507 18576718 ~ 18580163 (-) True G1265456
TU1445796 other downstream 38879 18576718 ~ 18579791 (-) False G1265456
TU1445577 other downstream 434547 18183791 ~ 18184123 (-) True G1265249
TU1444458 other downstream 1155693 17461828 ~ 17462977 (-) True G1264199
TU1446969 other upstream 428506 19108559 ~ 19109357 (-) True G1266471
TU1447224 other upstream 754965 19435018 ~ 19453770 (-) True G1266708
TU1448004 other upstream 1587913 20267966 ~ 20268488 (-) True G1267414
TU1448043 other upstream 1610297 20290350 ~ 20290673 (-) True G1267452
TU1449275 other upstream 2278319 20958372 ~ 20960089 (-) True G1268555

Expression Profile