Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036944232.1 |
| length | 6539 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 47 |
| gene id | smchd1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 28337647 ~ 28377476 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|---|
| K23113 | SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1458406 | lncRNA | downstream | 43516 | 28292660 ~ 28294131 (-) | True | G1276912 |
| TU1458376 | lncRNA | downstream | 55831 | 28279627 ~ 28281816 (-) | True | G1276887 |
| TU1458385 | lncRNA | downstream | 89875 | 28246563 ~ 28247772 (-) | True | G1276896 |
| TU1458351 | lncRNA | downstream | 123619 | 28205662 ~ 28214028 (-) | False | G1276872 |
| TU1458441 | lncRNA | upstream | 15035 | 28392511 ~ 28392785 (-) | True | G1276947 |
| TU1458442 | lncRNA | upstream | 16196 | 28393672 ~ 28393997 (-) | True | G1276948 |
| TU1458443 | lncRNA | upstream | 16716 | 28394192 ~ 28394507 (-) | True | G1276949 |
| TU1458444 | lncRNA | upstream | 18777 | 28396253 ~ 28396649 (-) | True | G1276950 |
| TU1458506 | lncRNA | upstream | 70117 | 28447593 ~ 28447800 (-) | True | G1277012 |
| XM_036944231.1 | mRNA | downstream | 1826 | 28316887 ~ 28335821 (-) | True | emilin2b |
| XM_021562958.2 | mRNA | downstream | 1829 | 28316887 ~ 28335818 (-) | False | emilin2b |
| trnal-uag-3 | mRNA | downstream | 28836 | 28308734 ~ 28308811 (-) | True | trnal-uag-3 |
| XM_021562949.2 | mRNA | downstream | 100765 | 28232133 ~ 28236882 (-) | True | myl12.1 |
| XM_021562948.2 | mRNA | downstream | 105972 | 28227285 ~ 28231675 (-) | True | fastkd3 |
| XM_021562966.2 | mRNA | upstream | 181718 | 28559194 ~ 28565539 (-) | False | adcyap1a |
| XM_021562969.2 | mRNA | upstream | 181718 | 28559194 ~ 28565539 (-) | False | adcyap1a |
| XM_021562970.2 | mRNA | upstream | 181718 | 28559194 ~ 28565539 (-) | False | adcyap1a |
| XM_021562967.2 | mRNA | upstream | 181718 | 28559194 ~ 28565541 (-) | False | adcyap1a |
| XM_021562968.2 | mRNA | upstream | 181718 | 28559194 ~ 28565541 (-) | False | adcyap1a |
| TU1458397 | other | downstream | 71892 | 28261540 ~ 28265755 (-) | True | G1276905 |
| TU1458103 | other | downstream | 246806 | 28090494 ~ 28090841 (-) | True | G1276639 |
| TU1458029 | other | downstream | 378213 | 27959052 ~ 27959434 (-) | True | G1276566 |
| TU1457301 | other | downstream | 1106168 | 27228880 ~ 27231479 (-) | True | LOC110489905 |
| TU1456819 | other | downstream | 1393483 | 26943295 ~ 26944164 (-) | True | LOC110489898 |
| TU1458959 | other | upstream | 181835 | 28559311 ~ 28565513 (-) | True | adcyap1a |
| TU1459005 | other | upstream | 323726 | 28701202 ~ 28703553 (-) | True | LOC110489947 |
| TU1460464 | other | upstream | 1253549 | 29631025 ~ 29631768 (-) | True | G1278860 |
| TU1460659 | other | upstream | 1601699 | 29979175 ~ 29988516 (-) | False | dlgap1b |
| TU1463174 | other | upstream | 3486758 | 31864234 ~ 31864636 (-) | True | G1281361 |
