RNA id: XM_021563084.2


Basic Information

Item Value
RNA id XM_021563084.2
length 3432
RNA type mRNA
GC content 0.47
exon number 2
gene id inhbaa
representative True

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 31962835 ~ 31974011 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gagagagagaaacagcaaaGACAGAGCCCTGCCCACTCTCACAAAACCATTCAACTTGAGCACAGAGAGCACTCCCAGACCTCTACAGAGAACTCCACTTCCCTGGGGTAACCTTCTGAAGACGATTGCCCTTCCCACACAAAACTTCCCAAAGGACCAGCCATCCTCTCCGCTCCAGCACTGGCAAGACCATCTTCTGTCCACacatctctttctccatccatctctcattTTTCAATACAAGGATTATAATTTTTCGTTCTCACTTTTCCTTCAGTTTAAGGTGtcactttttaaaaacttttagtCCAAGTCTTAGTATTTATTTGTCCAGAGTTTTTAAGTATACTTTGTCTGGAGGAtttccccccacccctcttttgGCAGGAGGACCTACACTTTTTCCGCCAATCATCATTTCGCCTGCCAGTTGGTGCGTGCTGAGTTGCTCTTAGTTGTCTGGACAGCAGACCTCGTCTCATCAAGGATGTCTCCTCTGCCCCTGCTGAGTGGGATCCTTCTGCTCTTTACCCATAGCTGCGCCGGTGGCAACTCTTTGCCCATGGCGGACTCCTTAGCGATGGGTGGTGGCCAGACGCCACCACAAACCCAGTCCCAATCCCAGCTGGCACCGGAGGTCACCAACTGCCCGTCATGTGCCCTGGCACGGCTAAACGAGGAGGAGGACGGCGGCAAAACCGACGTGGTGGAGGCGGTGAAGAGGCACATTCTCAACATGCTGCACCTGCAGGCACGGCCCAACGTCACGCATCCGGTGCCCCGCGCTGCTCTGCTCAATGCCATCCGCAAGCTGCATGTGGGACGCGTGGCCGAGGACGGCAGCGTCCAGATTGAGGACGAGGGCCACGGGCGTCTCGACCCCGCTGACATGGCCGAGACGACTGAGATCATTACCTTTGCAGAGGCTGGCGACTCCCAGGGCGCGGTCAACTTCCTCATCTCCAAAGAGGGCGGCGAGCTGTCTCTGGTGGAGGCTAATGTATGGATCTTCCTCCGGCTAGCCAAGACCAACCGCAGCCGTGCCAAGGTCACTATCCGCCTGCTGCAGCAGCACCGTGGTGGAGACGGCCGTGAGGAGACGGCGCCGGTGCCGTTGGCTGAGAAGGTGGTGGACACGCGGCGCAGCGGCTGGCACACTTTTTCAGTCTCGGCCAGCGTCCAGGCCCTGCTGAAGCGCGGCGGCAGTACACTCAGTTTGAGGGTTTCCTGCCCGCTGTGTGCCAACGCTGGCGCCACGCCCATCCTGGTGTCGGCCAGCAGCGGCCAGGAGCGGGAGCAGTCCCACCGGCCCTTCCTGATGGCAGTGGTGCAGCAGGGTGAGGGCGGTGAGCCACGGCGGCGCCGCAAGCGGGGCCTGGAGTGCGACGGCAAGGTGAGTGCCTGCTGCAAGCGCCAGTTCTACGTCAATTTCAAGGACATTGGCTGGAGTGACTGGATCATAGCGCCAGGGGGCTACCACGCCAACTACTGCGAAGGCGACTGCCCCAGCCACGTGGCCAGCATTACAGGCTCCTCGCTGTCCTTCCACTCCACTGTCATCAACCACTACCGCATACGGGGCTACGCACCCTTCCAGAACATCAAGTCGTGCTGCGTGCCGACGCGGCTACGCGCCATGTCCATGCTCTACTACAACGAGGAGCAGAAGATCGTCAAAAAGGATATCCAGAACATGGTCGTAGAGGAGTGTGGCTGCTCCTAAAAGCCTAGCGGAACTAGAGGGGCTGGGAGGTTGGTCTCATGCCCAGAGAGAAAGAACTAAATGAAAGAAGAGGAGgtagatgaaggaaggagaaTGCATTGAGTCACTgttcttctccccttctccctttatctctcgctctctcttaagCGCATGACACTTGTCAAGACCGACTCCTTTTTGGACTTGATGACTGGCTTGTTCTCCGGTCGTCGGCAAGTCCAGGGGGTATCTACAACTCAGAGAAGTCTCTGCGGCACTttcagaaaaaaaaagaaaataatatttaatatatttttgttACAAAACAAAGAGAGTGAGGTGAGAGGATATTTATGTGACCCAGATACGGTGTAGTTGCTCCTTTAATGCACTGCAAGACGAGAGACCATGCGAATGAGGTGCCTGAAAAATCTCAAAACTATGCAACTTGTCAAGTATTacgatttgtatttttattttgccTGTTTCATTTTCTCAATTGTTTACTTTTTGAAAACATAAATAAGGAAAACTTTTTAAAACTATGTTTTACGTTTGTTTTagtgtgcctgtgtttgtgtgtgtgtggtgtgtgtgtgttgagagataCTTGAAAGAAACAAGTTTGACCAGATGCTGGAACCAAACATTTCTCTATgtataattattataatttttgttATTGATAATAatattattgtttattgtttttaaaAACGTTACGAACGTTTTCAGTTTGCACTATACCAACATTCTGATCAGCCTAGTCACAAATATAAATGGTATTCTAAAAGAGGTTTAAAAGCACTTATGAATGGACAAATCAATAGAGCACATGAGTTTAAAACATTTCGAGAACACGTAGACACATTTATGACTACAGCATTTTTTTGACCACACCAAAGAGTTTGTGTGAGCGTTGCCAACTGTCACTGTGAGGCTGTTAGCAATCACTTCACAAAGACGTCCAGGTCAGCATTAGCATAGCCTAGCATCAGTGCCCAAACATTCCTTCAGCTCCTGCACATAAACGTAATTTCCCATAATGCTTCACTCTGACCTATGTTTTTCACACATTACTATGTTGTTGGAGAGTGTATTATTAATGTAACTGACAAAAAAAGCACTTATGTAGGCCAATGTTgtcgtgttttggaggaaaaTGAATGTGTCCATTGAATTTGGAAATATCCTGAAGATCTAGTTAAAACAGTTTAATATTTCCAAATATCTCACCAAATATTGGAAGGTCCCATCTTACAAAAAGTAAAACAAATTGTTTGGAGGGTTGGTTTCTTTCGATGTCTGAAATTAAGCAATTCGAAACTTAGTAACACTTTATTTTCCTGCCCACTGTTTACCGGGTAGTTATTTAGAAATTACCTTATCAATACATAGTCATTACACTTTAGCTTCCTTGAGATTCATTGACACAAGCTTCACAATATACCATTTGGTACTAGATACAGCAGATACCAGTTGTATTGAATTCTATTTCAATGCTGATAGTGTTGAAGTACTGTCCAAGAAAGTATCCATTGCACATAGATTATTGGTTAATACCATGCAAAGTATGCACATTTAAAATGGGatgtcaaataaagtgttaccgaaACCTTCTCTCACAAAGTTGTGTCTTGAAGTATAGACTCATTAAACATTATAGAAGCACAATGTATCTTACATTTTGCATTGATGCATACAAAAATACTAATagagaaaacatt

Function

GO:

id name namespace
GO:0031101 fin regeneration biological_process
GO:0005576 extracellular region cellular_component
GO:0008083 growth factor activity molecular_function

KEGG:

id description
K04667 INHBA; inhibin beta A chain

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1463247 lncRNA upstream 7909 31954564 ~ 31954926 (+) True G1281433
TU1463246 lncRNA upstream 8389 31954026 ~ 31954446 (+) True G1281432
TU1463242 lncRNA upstream 11509 31951068 ~ 31951326 (+) True G1281428
TU1463237 lncRNA upstream 16260 31946357 ~ 31946575 (+) True G1281423
TU1463223 lncRNA upstream 24847 31937787 ~ 31937988 (+) True G1281410
TU1463265 lncRNA downstream 1859 31975870 ~ 31976228 (+) True G1281447
TU1463266 lncRNA downstream 2234 31976245 ~ 31976450 (+) True G1281448
TU1463268 lncRNA downstream 6346 31980357 ~ 31980734 (+) True G1281450
TU1463279 lncRNA downstream 21318 31995329 ~ 31995593 (+) True G1281461
TU1463451 lncRNA downstream 146952 32120963 ~ 32121903 (+) True G1281623
XM_021563083.2 mRNA upstream 38356 31910786 ~ 31924479 (+) True LOC110490007
XM_036944299.1 mRNA upstream 170689 31758726 ~ 31792146 (+) True LOC110490003
XM_036944298.1 mRNA upstream 515337 31441494 ~ 31447498 (+) True nrn1a
XM_036944292.1 mRNA upstream 630138 31306646 ~ 31332697 (+) True wdr97
XM_021563065.2 mRNA upstream 656398 31289767 ~ 31306437 (+) False dync2i1
LOC118938888 mRNA downstream 34110 32008121 ~ 32011745 (+) True LOC118938888
XM_021563088.2 mRNA downstream 376794 32350805 ~ 32479989 (+) False LOC110490011
XR_005036356.1 mRNA downstream 958785 32932796 ~ 32932850 (+) True LOC118938962
XM_021563090.2 mRNA downstream 1040195 33014206 ~ 33016957 (+) False LOC110490013
LOC110490956 mRNA downstream 1125870 33099881 ~ 33262044 (+) True LOC110490956
TU1461526 other upstream 1015505 30944171 ~ 30947330 (+) True G1279833
TU1461105 other upstream 1554818 30395867 ~ 30408017 (+) False htr5ab
TU1460985 other upstream 1659416 30303033 ~ 30303419 (+) True G1279349
TU1458797 other upstream 3147025 28815366 ~ 28815810 (+) True G1277279
TU1458659 other upstream 3338617 28574316 ~ 28624218 (+) True G1277159
TU1463280 other downstream 22156 31996167 ~ 31996513 (+) True G1281462
TU1464164 other downstream 713547 32687558 ~ 32698036 (+) False G1282302
TU1466288 other downstream 2137796 34111807 ~ 34112271 (+) True G1284354
TU1468667 other downstream 4061572 36035583 ~ 36093396 (+) False G1286648
TU1469571 other downstream 4535067 36509078 ~ 36510512 (+) True G1287489

Expression Profile