Gene
RNA
| Item | Value |
|---|---|
| RNA id | LOC118938888 |
| length | 933 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 2 |
| gene id | LOC118938888 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 32008121 ~ 32011745 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0042462 | eye photoreceptor cell development | biological_process |
| GO:0031017 | exocrine pancreas development | biological_process |
| GO:0051570 | regulation of histone H3-K9 methylation | biological_process |
| GO:0032776 | DNA methylation on cytosine | biological_process |
| GO:0060037 | pharyngeal system development | biological_process |
| GO:0010842 | retina layer formation | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1463279 | lncRNA | upstream | 12528 | 31995329 ~ 31995593 (+) | True | G1281461 |
| TU1463268 | lncRNA | upstream | 27387 | 31980357 ~ 31980734 (+) | True | G1281450 |
| TU1463266 | lncRNA | upstream | 31671 | 31976245 ~ 31976450 (+) | True | G1281448 |
| TU1463265 | lncRNA | upstream | 31893 | 31975870 ~ 31976228 (+) | True | G1281447 |
| TU1463247 | lncRNA | upstream | 53195 | 31954564 ~ 31954926 (+) | True | G1281433 |
| TU1463451 | lncRNA | downstream | 109218 | 32120963 ~ 32121903 (+) | True | G1281623 |
| TU1463668 | lncRNA | downstream | 393773 | 32405518 ~ 32405839 (+) | True | G1281830 |
| TU1463706 | lncRNA | downstream | 449839 | 32461584 ~ 32461989 (+) | True | G1281868 |
| TU1463627 | lncRNA | downstream | 465179 | 32476924 ~ 32478439 (+) | False | LOC110490011 |
| TU1463625 | lncRNA | downstream | 467216 | 32478961 ~ 32480547 (+) | True | LOC110490011 |
| XM_021563084.2 | mRNA | upstream | 34110 | 31962835 ~ 31974011 (+) | True | inhbaa |
| XM_021563083.2 | mRNA | upstream | 83642 | 31910786 ~ 31924479 (+) | True | LOC110490007 |
| XM_036944299.1 | mRNA | upstream | 215975 | 31758726 ~ 31792146 (+) | True | LOC110490003 |
| XM_036944298.1 | mRNA | upstream | 560623 | 31441494 ~ 31447498 (+) | True | nrn1a |
| XM_036944292.1 | mRNA | upstream | 675424 | 31306646 ~ 31332697 (+) | True | wdr97 |
| XM_021563088.2 | mRNA | downstream | 339060 | 32350805 ~ 32479989 (+) | False | LOC110490011 |
| XR_005036356.1 | mRNA | downstream | 921051 | 32932796 ~ 32932850 (+) | True | LOC118938962 |
| XM_021563090.2 | mRNA | downstream | 1002461 | 33014206 ~ 33016957 (+) | False | LOC110490013 |
| LOC110490956 | mRNA | downstream | 1088136 | 33099881 ~ 33262044 (+) | True | LOC110490956 |
| XM_021563092.2 | mRNA | downstream | 2265276 | 34277021 ~ 34325910 (+) | False | LOC110490016 |
| TU1463280 | other | upstream | 11608 | 31996167 ~ 31996513 (+) | True | G1281462 |
| TU1461526 | other | upstream | 1060791 | 30944171 ~ 30947330 (+) | True | G1279833 |
| TU1461105 | other | upstream | 1600104 | 30395867 ~ 30408017 (+) | False | htr5ab |
| TU1460985 | other | upstream | 1704702 | 30303033 ~ 30303419 (+) | True | G1279349 |
| TU1458797 | other | upstream | 3192311 | 28815366 ~ 28815810 (+) | True | G1277279 |
| TU1464164 | other | downstream | 675813 | 32687558 ~ 32698036 (+) | False | G1282302 |
| TU1466288 | other | downstream | 2100062 | 34111807 ~ 34112271 (+) | True | G1284354 |
| TU1468667 | other | downstream | 4023838 | 36035583 ~ 36093396 (+) | False | G1286648 |
| TU1469571 | other | downstream | 4497333 | 36509078 ~ 36510512 (+) | True | G1287489 |
| TU1471681 | other | downstream | 6171691 | 38183436 ~ 38184003 (+) | True | G1289491 |
