Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1475510 |
| length | 558 |
| lncRNA type | sense_over |
| GC content | 0.46 |
| exon number | 1 |
| gene id | trnap-cgg-152 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 41444226 ~ 41444783 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1475503 | lncRNA | upstream | 24802 | 41419008 ~ 41419424 (+) | True | trnap-cgg-127 |
| TU1475501 | lncRNA | upstream | 35137 | 41408749 ~ 41409089 (+) | True | trnap-cgg-116 |
| TU1475500 | lncRNA | upstream | 36094 | 41407848 ~ 41408132 (+) | True | trnap-cgg-115 |
| TU1475499 | lncRNA | upstream | 36708 | 41406973 ~ 41407518 (+) | True | trnap-cgg-114 |
| TU1475464 | lncRNA | upstream | 62458 | 41360807 ~ 41381768 (+) | True | trnap-cgg-68 |
| TU1475542 | lncRNA | downstream | 65404 | 41510187 ~ 41510710 (+) | True | G1293019 |
| TU1475543 | lncRNA | downstream | 67292 | 41512075 ~ 41512941 (+) | True | G1293020 |
| TU1475548 | lncRNA | downstream | 83687 | 41528470 ~ 41529058 (+) | True | G1293025 |
| TU1475550 | lncRNA | downstream | 84384 | 41529167 ~ 41529827 (+) | True | G1293027 |
| TU1475554 | lncRNA | downstream | 88497 | 41533280 ~ 41533826 (+) | True | trnap-cgg-205 |
| trnap-cgg-151 | mRNA | upstream | 682 | 41443473 ~ 41443544 (+) | True | trnap-cgg-151 |
| trnap-cgg-150 | mRNA | upstream | 1584 | 41442571 ~ 41442642 (+) | True | trnap-cgg-150 |
| trnap-cgg-149 | mRNA | upstream | 2446 | 41441709 ~ 41441780 (+) | True | trnap-cgg-149 |
| trnap-cgg-148 | mRNA | upstream | 3308 | 41440847 ~ 41440918 (+) | True | trnap-cgg-148 |
| trnap-cgg-147 | mRNA | upstream | 4168 | 41439987 ~ 41440058 (+) | True | trnap-cgg-147 |
| trnap-cgg-153 | mRNA | downstream | 453 | 41445236 ~ 41445307 (+) | True | trnap-cgg-153 |
| trnap-cgg-154 | mRNA | downstream | 1354 | 41446137 ~ 41446208 (+) | True | trnap-cgg-154 |
| trnap-agg-153 | mRNA | downstream | 2255 | 41447038 ~ 41447109 (+) | True | trnap-agg-153 |
| trnap-agg-154 | mRNA | downstream | 3156 | 41447939 ~ 41448010 (+) | True | trnap-agg-154 |
| trnap-cgg-155 | mRNA | downstream | 4057 | 41448840 ~ 41448911 (+) | True | trnap-cgg-155 |
| TU1473916 | other | upstream | 1313492 | 40120269 ~ 40130734 (+) | True | LOC110490048 |
| TU1473879 | other | upstream | 1376319 | 40067558 ~ 40067907 (+) | True | G1291464 |
| TU1472866 | other | upstream | 2317217 | 39126272 ~ 39127009 (+) | True | G1290614 |
| TU1472790 | other | upstream | 2406567 | 39037005 ~ 39037659 (+) | False | G1290549 |
| TU1471909 | other | upstream | 2843985 | 38594880 ~ 38600241 (+) | True | G1289710 |
| TU1475600 | other | downstream | 138590 | 41583373 ~ 41588144 (+) | False | G1293072 |
| TU1475602 | other | downstream | 138590 | 41583373 ~ 41588087 (+) | True | G1293072 |
| TU1475855 | other | downstream | 464251 | 41909034 ~ 41909611 (+) | True | G1293295 |
| TU1476968 | other | downstream | 1320070 | 42764853 ~ 42767937 (+) | True | G1294319 |
| TU1478092 | other | downstream | 2152141 | 43596924 ~ 43597464 (+) | True | G1295348 |
