Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021563291.2 |
| length | 912 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 3 |
| gene id | mrps17 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 43998013 ~ 43999931 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0005840 | ribosome | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02961 | RP-S17, MRPS17, rpsQ; small subunit ribosomal protein S17 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1478575 | lncRNA | upstream | 35771 | 43961985 ~ 43962297 (+) | True | G1295789 |
| TU1478574 | lncRNA | upstream | 37171 | 43960438 ~ 43960897 (+) | True | G1295788 |
| TU1478573 | lncRNA | upstream | 38462 | 43959399 ~ 43959606 (+) | True | G1295787 |
| TU1478561 | lncRNA | upstream | 48668 | 43949184 ~ 43949400 (+) | True | G1295775 |
| TU1478522 | lncRNA | upstream | 77608 | 43920233 ~ 43920460 (+) | True | G1295736 |
| TU1478631 | lncRNA | downstream | 27656 | 44027587 ~ 44027878 (+) | True | G1295843 |
| TU1478637 | lncRNA | downstream | 37459 | 44037390 ~ 44037673 (+) | True | G1295849 |
| TU1478662 | lncRNA | downstream | 71055 | 44070986 ~ 44123435 (+) | True | G1295872 |
| TU1478677 | lncRNA | downstream | 94871 | 44094802 ~ 44095443 (+) | True | G1295887 |
| TU1478835 | lncRNA | downstream | 152764 | 44152695 ~ 44153020 (+) | True | G1296030 |
| XM_021563282.2 | mRNA | upstream | 279722 | 43698455 ~ 43718346 (+) | False | mntb |
| XM_021563281.2 | mRNA | upstream | 279723 | 43698457 ~ 43718345 (+) | True | mntb |
| LOC110490730 | mRNA | upstream | 300250 | 43696212 ~ 43697818 (+) | False | LOC110490730 |
| XM_021563280.2 | mRNA | upstream | 306550 | 43641743 ~ 43691518 (+) | False | LOC110490107 |
| NM_001160597.2 | mRNA | downstream | 5482 | 44005413 ~ 44024583 (+) | True | nipsnap2 |
| XM_036944415.1 | mRNA | downstream | 173421 | 44173352 ~ 44319896 (+) | False | cblb |
| XM_036944414.1 | mRNA | downstream | 173563 | 44173494 ~ 44319896 (+) | False | cblb |
| XM_036944416.1 | mRNA | downstream | 173565 | 44173496 ~ 44319896 (+) | False | cblb |
| XM_021563294.2 | mRNA | downstream | 173570 | 44173501 ~ 44326246 (+) | False | cblb |
| TU1478516 | other | upstream | 81589 | 43916178 ~ 43916479 (+) | True | G1295730 |
| TU1478092 | other | upstream | 400604 | 43596924 ~ 43597464 (+) | True | G1295348 |
| TU1476968 | other | upstream | 1230131 | 42764853 ~ 42767937 (+) | True | G1294319 |
| TU1475855 | other | upstream | 2088457 | 41909034 ~ 41909611 (+) | True | G1293295 |
| TU1475602 | other | upstream | 2409981 | 41583373 ~ 41588087 (+) | True | G1293072 |
| TU1478633 | other | downstream | 29505 | 44029436 ~ 44029861 (+) | True | G1295845 |
| TU1478844 | other | downstream | 321572 | 44321503 ~ 44326179 (+) | True | cblb |
| TU1479092 | other | downstream | 547248 | 44547179 ~ 44581048 (+) | True | G1296266 |
| TU1479009 | other | downstream | 649770 | 44649701 ~ 44652079 (+) | True | G1296185 |
| TU1481520 | other | downstream | 2254408 | 46254339 ~ 46260437 (+) | False | G1298452 |
