Item | Value |
---|---|
RNA id | TU1490279 |
length | 480 |
lncRNA type | sense_over |
GC content | 0.54 |
exon number | 2 |
gene id | sox5 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_048579.1 |
NCBI id | CM023233.2 |
chromosome length | 81569517 |
location | 53352462 ~ 53471763 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU1490399 | lncRNA | upstream | 20726 | 53331156 ~ 53331736 (+) | True | G1306411 |
TU1490378 | lncRNA | upstream | 47589 | 53304663 ~ 53304873 (+) | True | G1306390 |
TU1490377 | lncRNA | upstream | 48180 | 53303917 ~ 53304282 (+) | True | G1306389 |
TU1490374 | lncRNA | upstream | 54154 | 53298085 ~ 53298308 (+) | True | G1306386 |
TU1490372 | lncRNA | upstream | 55096 | 53296993 ~ 53297366 (+) | False | G1306385 |
TU1490727 | lncRNA | downstream | 215203 | 53582548 ~ 53583352 (+) | True | G1306708 |
TU1490749 | lncRNA | downstream | 222389 | 53589734 ~ 53629404 (+) | True | G1306723 |
TU1490782 | lncRNA | downstream | 307964 | 53675309 ~ 53710289 (+) | True | G1306755 |
TU1490747 | lncRNA | downstream | 331402 | 53698747 ~ 53705437 (+) | True | scube1 |
TU1490733 | lncRNA | downstream | 484780 | 53852125 ~ 53859551 (+) | True | LOC110490313 |
XM_036944603.1 | mRNA | upstream | 210671 | 53114950 ~ 53141791 (+) | True | bcat1 |
XM_036944602.1 | mRNA | upstream | 266302 | 53077695 ~ 53086160 (+) | False | cfap94 |
XM_021563604.2 | mRNA | upstream | 266302 | 53077725 ~ 53086160 (+) | True | cfap94 |
XM_021564204.2 | mRNA | upstream | 299056 | 53045349 ~ 53053406 (+) | False | LOC110490748 |
XM_021563619.2 | mRNA | downstream | 184853 | 53552198 ~ 53554958 (+) | True | c15h12orf45 |
XM_036944605.1 | mRNA | downstream | 217714 | 53585059 ~ 53705460 (+) | False | scube1 |
XM_036944606.1 | mRNA | downstream | 217714 | 53585059 ~ 53705460 (+) | False | scube1 |
XM_036944609.1 | mRNA | downstream | 217714 | 53585059 ~ 53705460 (+) | False | scube1 |
XM_036944611.1 | mRNA | downstream | 217714 | 53585059 ~ 53705460 (+) | False | scube1 |
TU1489077 | other | upstream | 839412 | 52512629 ~ 52513050 (+) | True | G1305302 |
TU1488634 | other | upstream | 1437452 | 51914597 ~ 51915010 (+) | True | G1304886 |
TU1487699 | other | upstream | 1699462 | 51587193 ~ 51653000 (+) | False | G1304083 |
TU1490729 | other | downstream | 213196 | 53580541 ~ 53583352 (+) | False | G1306708 |
TU1490737 | other | downstream | 521883 | 53889228 ~ 53890391 (+) | True | LOC110490314 |
TU1492368 | other | downstream | 1790661 | 55158006 ~ 55167163 (+) | False | LOC110490339 |
TU1492428 | other | downstream | 1895613 | 55262958 ~ 55266276 (+) | False | G1308238 |
TU1492492 | other | downstream | 1980691 | 55348036 ~ 55349205 (+) | True | G1308299 |