RNA id: TCONS_00043835


Basic Information

Item Value
RNA id TCONS_00043835
length 6829
RNA type mRNA
GC content 0.38
exon number 13
gene id XLOC_022205
representative False

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 13842982 ~ 13877898 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CGCCCCATGCACAGACCACACAGACAAACGCACACATGATTAACTATATCAGATCCATACATCAGCACTAGGTGGCGCAAAGGTGGtaagtttaaaaaatatactggttatttatttttacactcaATGCTGCTTGCTCTTACTCAGCAGTTGtttaaataacataaacataATCTTTAGGGTAACATTATTCAAACAAAgtataaatgttaatatgttgaaTGTATGAAATtatactttgttattttattatctgCAGTGTCATGCTGACACTCAGAACTCTTTTCCAGCTCTTATCAGCAAGACTAACACTCATTATACATTCCGCATGCGCGCTCTTTTGATTGGACTGATGAGAGTTTAGCGTGTTTGCCATTAAAGCGTTTAGCTGTCAATCACCGTGGCACATGTGTTGTTGTTCACAAGCGCCGCCCTCTGACACGTTGTCTCCGCCCACCTTAATTTTTCTCTAGCGTCGTCGCGTCGCTGACGTCAGTTTACTCCAGCCTTCTGAAATGATGGGCAGTCGAGCGAGCGCTGGTGAGTTTCTCTCTACACCAATAAAATCACAGAGCCTCACCGTGTCATTTGAACAGGGAAGAAGGAAACTGTCTTAAAGAAATGCCTCTGTAGTCTTTATTGTTACATCTCAGTCTGTTACATCCGTTTAGCCTTTAAATCCCAGTGTTTTTGTTCCGTTTAGTAAAGAACACGATATGTAAGTAGCACGTTGTTGTCATGCGTTTGATTCTGCTGGATATGTTCTTCTGTCTActaacatttctaaacacaactTGGCTTGATCTAATAGCATTTGATGTTTGGTTTAATTGCAAATAACCGAATGCTTGTTTTGAATGTGATGCATTGCATAAAATCATTAGCAGGCTGTTATTGCAGTCGCCGAGGCTGAGCCCTGTTAAATAAGGGATTGTGCTAATAACATTATGACAAGATGAGCCTTCCGCTCTCACGTTCAGAAGTGTTTGGGCAGTTGAGGAAAGAACTGCATGATGATACCGCATTTCACCAGTCAGATGTGCATATTTTCATCATCATGGGCGCTTCGGGAGATCTGGCCAAAAAGAAAATCTATCCAACTTTGTGGTGGTTATTCAGAGATGGTCTCCTCCCTGAACAGACATATTTTGTGGGTTTTGCTCGCTCAGATCTGACTGTGGATGCCATACGCATAGCCTGCATGCCCTACATGAAGGTAGTAGACAATGAGGCAGAGCGTCTTGCTGCTTTCTTCAGCCGAAACTCTTACATCAGTGGGAAGTATGTGGAAGAATCCTCTTTCTCTGACCTGAACACACACCTACTGTCTCTGCCTGGAGGTGCTGAGGCCAACCGGCTCTTCTACCTGGCCCTGCCACCCAGCGTCTACCATGATGTCACCAAAAATATCAAACATCAGTGCATGAGCACCAAAGGCTGGAACAGGGTGATTGTGGAGAAGCCGTTTGGCCGTGATCTGCAGAGCTCAGAGGAGTTATCCAGTCATCTATCCTCTCTCTTCACTGAGGAGCAAATCTACCGTATAGACCATTACCTGGGCAAAGAGATGGTGCAGAACCTGATGGTCCTCAGGTTTGGAAATCGGATTTTTGGTCCCATATGGAACCGAGACAGCGTGGCGTGTGTGGTTCTGACCTTCAAAGAGCCGTTTGGTACCCAGGGCCGCGGAGGATATTTTGACGATTTTGGTATCATTCGTGATGTGATGCAGAACCACCTGCTTCAGATGCTGAGTCTGGTGGCGATGGAGAAGCCTGCTTCCACCAGCTCTGATGATGTGCGGGATGAGAAGGTAAAAGTGCTGAAGTGCATTGAGCCGGTCACTCTCTCAGATGTGGTTCTGGGTCAGTATGTCGGAGATCCAGATGGAGAAGGGGAGGCAAAACTGGGGTATCTAGATGACAAAACGGTCCCGAAAGGCTCCACTCAGGCTACATTTGCCACAGCAGTGCTTTATGTAAAGAACGAACGCTGGGATGGCGTCCCGTTTATTCTCCGGTGTGGAAAGGCTCTGAATGAGAGGAAAGCGGAGGTGCGTCTGCAGTTCACTGATGTTCCTGGAGACATCTTTAGCTCTCAGTGCCGGAGAAATGAGCTGGTGGTCCGTGTGCAGCCCAATGAGGCCATTTACGCCAAGATGATGAGCAAGAAACCTGGAGTCTATTTTAGCCCTGAGGAGACCGAGCTGGACCTGACCTACCATAGCAGATACaggGATGTAAAGCTGCCTGATGCTTATGAACGTCTGATTTTGGACGTCTTTTGTGGCAGTCAGATGCATTTTGTACGCAGTGATGAGTTGAGGGAAGCCTGGAGGATCTTCACTCCTCTCCTTCATCAGATAGAGTCTGAGAAAACACCACCCATCAAATACAAATACGGGAGTCGTGGTCCCGCTGAGGCTGATGAGCTGGTGCAGAAAGTGGGCTTCCGCTACGAGGGAACATACAAATGGGTGAATCCACACAAACTGTGAAAGCAGCAGATGCGGAAGCTGAAgcctgtttaaaaacaaaaaatcagcAGTCGAGTGCCTGAAACGAGcactttaaacaaactaaatattgaAAATTCGTTCTGTTTAAGCACTGCATTTACAGAAAGACCAACGTGAttggaaaacctttttttttagcaTGTTATGAATCATAACCAGCTCCTTGTGGTATATGATTTAGAACAGTGTTTGTTAAccaagttcctggaggaccaccagctctgcacattttccatgtcgttttaactaaacacacctgattaagatgatcagctcattagcagagactgaaagacctgtaacggttgtgacagacaaaggagacatccaaaacatgcagtgttggtggtcctccggcaacgtggttgagaaacaatgctttaaaatatcttattattatttcattttatattttattgtacattattatttttgctgGTGCAGTTAAAGGGGCTGTTCACCCGAAAGTGAAAACTCTGTcatcttttacttgtttcaatCCTGCGagtatctttcttctgttgaacactaaagaagatattttgaagaaagttggaaagctgtaaccattaaACTTCTATTGATTTGTATGGAAGACTacaactttcttcaaaacatcttcttttgtatttaacagcaGAAAGAATCTCCTAACAGTTTGGAAGCACCTGCGGGTGTGTAAATTGTAagtatatttttgggtgaaccttcTCTTTAAGAACTATTCAGATGTTAATGCACTGTCATTCCTTGTGTTCACATTCTACTGTCTTTAAGAAACACAAATCTGTTTCATTCCTTTTTTTCTCACGCTAAAGTCTTAACATTAAATGCTGCTTATGTTTCAGAAGTGTTTTATGGGCAGGTGGTGGTTTAAAGTACAGTCTAGTACTGTAGTGATCCTTGCGTTCATGTATTGTTGAAATGTATAGATAAGCTGTACAAAACTACACACAAAATAAGAAATTCCAGAAACAATGGGATCAATAGTTGTCCAAGTGAGTCACAATGATGTTTAGTCTTACAAAGCAGATGCATTACGTGCCACAGCCTCCTGTAAAAATAGTCCAGCTGAGCTCTGATGTTCATTGTTACACCATTATCAAAATATGAGCCAAACTTGAGGATGATGTATTTCTGCTTGCTATCACTTTTGACATTGGATAAAGTTACATAAATGagcttaaagtgatagttcgcctaaaaattttacttttcacaatatattctaaaaaatgttggaaaaattaaaattttgttttattttacttgttacaaacctttatgaggttttaaacacaaaataagaaatcTTAAGAAATGttggaaagctgtaaccattaacttccattcaCTTGTATGAAAGACTACAGCTTTCTACAAAATaccatcttttgtgtttaacagaagaaagaatcttcttaaggtttggaagcacttgagagTAAGTAAATAActagtatattttcatttttgggtgaactatccctttaaatagtaTTCTGATATTAATGCACAGTCATTCCCTTTGTCCACATTCTACTGTCTTTAAGAAACACAAATCTGTTTCATTCCTTTTTCTCAAGCAAAAGTCTTAATCTTAAATGCTGCTTATGTTTCAGAAATGTTTTATGGGCAGGTGGTGGTTTAAAGTACAGTCTGCTACTGCAGTGACTTTTGCGTTCATGTATTTtgttgaaatatataaataagctgTTTAATTGGACCACAAACGAGGAGAAATTCCAGAAACAATTTGGGATCAATAGTTGTCTGAGTCACAATTATGTATGTCTTACAAAGCATATGCATAACATGACGCATCCTTCTGTAAAAATAGTCCTGATGAGCTCTGATGTACATTGTTACATCACTATCAAACTGTGAGCTAAACTCGGGGATGGTGTATTTCTGCTTGCTATCATTTTTGACATTGGATAAAGCgtcataaaaaaaacaacttaaagggatagtttagctAAAAATGACGATTTTCTCACAGTAAAGTGGTTTTAAACTTATgaatgtctttcttctgttgaatccaaaacaaaatattttgaagaatgttggaaaaaacagccattaacatctctagaaaaaacaatggaagtGAATAGCtgttttcctttgtgttcagtTGAAAAAACTTAAGCAAAGGCTGAGTAAATAAGTGATTTTTGGGTGACCTATCCCTTTAATGTTATATGTATTGAGTGACGGCGATGTTGCTTTGACAGTCTTGACTGCTTTATGTTCGTATTTTTTTTATGCTTAAACATAATTTTGTGTAAAAGTTCTGCCTAGTGTATACTAGtgttttctattgtattataataGACACTTTTACAATAAAGCATAGTTAAGGTGCCACAGGTGTGTCCAAATTTCTCCAATGCTTTCAGTTCATATTGTATTTGTATACACATGGGCACTTTattgtataactttttttttaactgtactgATATGTCGAGGCTTGTTATGTACTTTTAATGCTGATAAACCAGCAGGTGGTGCAACGAACCAAGATCATGCAGCACTGACAGAATACATGCAGGTTGTGCATGTGTTTGACCTGGGGTGCCCAAACgttttcgtatgaagggccaaaaaccaaatatcgtTGAGTGCtctgggccgaaggtaaatataccaaactaaaTGAAATTAAAGTCGCTATAGCTAgtttattttcattgtatttaaaaataaatagaaaacattactttaaattgtattaactaatgcagtctGAATTTCTTTATTATAacttatgataataaaaatacaatcgcATTTTTATAGCACGGTGAAATTCAATGCGGAATACACTAGACCAGAATCAGCTTTTGCCTTTATTCACTAaagtcatcatttttttttatccatcgGGTGACtgtatgtgcatttaaaaaaaaaaatcaaactcatttaattgaaacatttcatttccatTTGCTTTTTGGATCTTAGCAatgcaacaaacaaaagattacatTCAATTAGAAATTACACTCTCTAAACAATCCccatctttctctcttttctcagatgggatggcaggccaaatcaaaggttaccatgggccaactttggccctagtttggacatctctgtGTTTGACAATGTTACATACTGTAGTCTATTTAGTTCTATTTCAAGGTCATTTGGTGATTTCATACAGTCACTCTACAGTAGGCGCCCTACATCTTAACAGCGGTGACATCAAGTCTAAACCAATGATTTCAAAAGAGGGGGTCGctggacaatgacaaggggtttcttggtgatttccaaaaagtcaaataaacttATTATACTAATAAAATTACCATATTtcatccataacccacagaagataaaaatagtagttaatagttacataacaaagcaacaacatgcaaataaaaagccatcagccttacagtttatttttgtcatagaattggtgtttatgttagattaacaacacagcaaacGTGTCAGccgcagcagattgatttttttagcaccaggttaaactttctgacatctttatggcaatcaaatacattaaacataagtaaaggccacaactgaacaatGGGAATGATCTCTGAGTGGCAGTTTTCAAAATTAAACCATGAATATGGGGCTGAActcattgtgcccaccagtctcttTAGGTGAGGGGAATTATAAAttaaacaagtgaataaatgactataaaatgatatggttgttagactgttgcacttgtgttgtcaatatgctcatgtttatagaAGCCTTTTGTGTGTGcaacgtttgtatatttataatcaCTTCCAAGAAATGTGGaggttgcgagtcactggcattgttattttggggttcgcgtactgaaaagtttgggaaccccagGTCTAAACAGTTTCTTGATCATGCAACAATTTTTCTGTCTTAATGGAAACTTTTAATGGTTCCACGCTGTATGTTTGCTGCATTTAAAGCATCTGTGTCTGGCTGATGCATTTTTTCTATGCGCGATTTAATTGTAACAGGAATCACAGAACTGATTGTTCTAACTTGATCATACTATTTTTAATTATCTAaatcaacataattcttgagttttttttctgacaacttaattgttttatgttcaactcacttaaatttgtaaaaacatttaagttaaattactcgatttgtgttgggacaacatgggggtattgtgtggaacccaacattttttagtttAGACCAAAAATAAACATACAGTGCTCCGCATAAATGAGTACGccaaattttaaacaattttcattgttttataggTATATattagtg

Function

GO:

id name namespace
GO:0006098 pentose-phosphate shunt biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0005975 carbohydrate metabolic process biological_process
GO:0006006 glucose metabolic process biological_process
GO:0090504 epiboly biological_process
GO:0016491 oxidoreductase activity molecular_function
GO:0050661 NADP binding molecular_function
GO:0003979 UDP-glucose 6-dehydrogenase activity molecular_function
GO:0004345 glucose-6-phosphate dehydrogenase activity molecular_function
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors molecular_function

KEGG:

id description
ko00030 Pentose phosphate pathway
ko00480 Glutathione metabolism
ko05230 Central carbon metabolism in cancer
ko05415 Diabetic cardiomyopathy
ko04147 Exosome

ZFIN:

id description
ZDB-GENE-070508-4 Enables UDP-glucose 6-dehydrogenase activity and glucose-6-phosphate dehydrogenase activity. Acts upstream of or within epiboly. Used to study hemolytic anemia. Human ortholog(s) of this gene implicated in several diseases, including anemia (multiple); cerebrovascular disease; favism; malaria (multiple); and neonatal jaundice. Orthologous to human G6PD (glucose-6-phosphate dehydrogenase).

Ensembl:

ensembl_id ENSDART00000193807

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00044971 lncRNA downstream 18790 13818507 ~ 13824192 (-) True XLOC_022203
TCONS_00044970 lncRNA downstream 33385 13806359 ~ 13809597 (-) True XLOC_022202
TCONS_00044969 lncRNA downstream 217397 13623519 ~ 13625585 (-) True XLOC_022199
TCONS_00044968 lncRNA downstream 277373 13561718 ~ 13565609 (-) True XLOC_022198
TCONS_00043830 lncRNA downstream 277631 13561718 ~ 13565351 (-) False XLOC_022198
TCONS_00043844 lncRNA upstream 532636 14407888 ~ 14415213 (-) True XLOC_022210
TCONS_00044972 lncRNA upstream 699246 14574498 ~ 14583539 (-) True XLOC_022211
TCONS_00044973 lncRNA upstream 860083 14735335 ~ 14738386 (-) True XLOC_022212
TCONS_00043849 lncRNA upstream 944155 14819407 ~ 14825434 (-) False XLOC_022214
TCONS_00043852 lncRNA upstream 957880 14833132 ~ 14846838 (-) False XLOC_022214
TCONS_00043833 mRNA downstream 2549 13832347 ~ 13840433 (-) True XLOC_022204
TCONS_00043829 mRNA downstream 547059 13289083 ~ 13295923 (-) True XLOC_022197
TCONS_00043828 mRNA downstream 911289 12926092 ~ 12931693 (-) True XLOC_022196
TCONS_00043826 mRNA downstream 929851 12900424 ~ 12913131 (-) False XLOC_022195
TCONS_00043827 mRNA downstream 929855 12904410 ~ 12913127 (-) True XLOC_022195
TCONS_00043839 mRNA upstream 65706 13940958 ~ 14059085 (-) False XLOC_022206
TCONS_00043840 mRNA upstream 65966 13941218 ~ 14057191 (-) True XLOC_022206
TCONS_00043842 mRNA upstream 318295 14193547 ~ 14216506 (-) True XLOC_022208
TCONS_00043843 mRNA upstream 389870 14265122 ~ 14403939 (-) True XLOC_022209
TCONS_00043845 mRNA upstream 867835 14743087 ~ 14769523 (-) False XLOC_022213
TCONS_00043832 other downstream 128482 13714386 ~ 13714500 (-) True XLOC_022201
TCONS_00043831 other downstream 207075 13635793 ~ 13635907 (-) True XLOC_022200
TCONS_00043813 other downstream 1774748 12068120 ~ 12068234 (-) True XLOC_022187
TCONS_00043805 other downstream 2255450 11587417 ~ 11587532 (-) True XLOC_022183
TCONS_00043804 other downstream 2310512 11532340 ~ 11532470 (-) True XLOC_022182
TCONS_00043841 other upstream 114112 13989364 ~ 13989482 (-) True XLOC_022207
TCONS_00043855 other upstream 958411 14833663 ~ 14858602 (-) False XLOC_022214
TCONS_00043860 other upstream 1126107 15001359 ~ 15014574 (-) True XLOC_022215
TCONS_00043863 other upstream 1232596 15107848 ~ 15107962 (-) True XLOC_022217
TCONS_00043872 other upstream 2070902 15946154 ~ 15951976 (-) True XLOC_022224

Expression Profile

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