Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036944791.1 |
| length | 5300 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 35 |
| gene id | LOC110490765 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 57979914 ~ 58017024 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
57,968,000
57,972,000
57,976,000
57,980,000
57,984,000
57,988,000
57,992,000
57,996,000
58,000,000
58,004,000
58,008,000
58,012,000
58,016,000
58,020,000
58,024,000
58,028,000
58,032,000
58,036,000
58,040,000
58,044,000
NC_048579.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1495793 | lncRNA | upstream | 23149 | 57955503 ~ 57956765 (+) | True | G1311156 |
| TU1495807 | lncRNA | upstream | 42586 | 57936903 ~ 57937328 (+) | True | G1311170 |
| TU1495795 | lncRNA | upstream | 59999 | 57914651 ~ 57919915 (+) | True | G1311158 |
| TU1495786 | lncRNA | upstream | 68400 | 57896052 ~ 57911514 (+) | True | G1311150 |
| TU1495734 | lncRNA | upstream | 112188 | 57865837 ~ 57867726 (+) | True | LOC110490411 |
| TU1495855 | lncRNA | downstream | 85216 | 58102240 ~ 58136639 (+) | False | LOC100136741 |
| TU1495905 | lncRNA | downstream | 135474 | 58152498 ~ 58154077 (+) | True | pmch |
| TU1495909 | lncRNA | downstream | 160934 | 58177958 ~ 58182569 (+) | False | LOC110490425 |
| TU1495907 | lncRNA | downstream | 163813 | 58180837 ~ 58182569 (+) | True | LOC110490425 |
| TU1495930 | lncRNA | downstream | 172199 | 58189223 ~ 58192466 (+) | True | G1311279 |
| XM_021563800.2 | mRNA | upstream | 8298 | 57969231 ~ 57971616 (+) | True | LOC110490417 |
| XM_021563799.2 | mRNA | upstream | 14850 | 57959580 ~ 57965064 (+) | True | LOC110490416 |
| XM_036944784.1 | mRNA | upstream | 33232 | 57921338 ~ 57946682 (+) | False | LOC110490413 |
| XM_036944783.1 | mRNA | upstream | 43513 | 57921341 ~ 57936401 (+) | True | LOC110490413 |
| XM_036944782.1 | mRNA | upstream | 71743 | 57898842 ~ 57908171 (+) | True | LOC110514203 |
| XM_036944805.1 | mRNA | downstream | 452 | 58017476 ~ 58035699 (+) | True | LOC110490419 |
| NM_001124335.1 | mRNA | downstream | 46202 | 58063226 ~ 58066442 (+) | True | LOC100135998 |
| XM_021563806.2 | mRNA | downstream | 79761 | 58096785 ~ 58102231 (+) | False | LOC110490421 |
| XM_021563805.2 | mRNA | downstream | 79764 | 58096788 ~ 58102231 (+) | True | LOC110490421 |
| XM_021562190.2 | mRNA | downstream | 97104 | 58114128 ~ 58136637 (+) | False | LOC100136741 |
| TU1494831 | other | upstream | 936652 | 57039799 ~ 57043262 (+) | False | G1310321 |
| TU1494231 | other | upstream | 1065691 | 56912331 ~ 56914223 (+) | True | G1309787 |
| TU1493522 | other | upstream | 1942511 | 56036902 ~ 56037403 (+) | True | G1309163 |
| TU1493506 | other | upstream | 1962966 | 56016448 ~ 56016948 (+) | True | G1309147 |
| TU1492670 | other | upstream | 2396059 | 55570018 ~ 55583855 (+) | False | LOC110490357 |
| TU1495856 | other | downstream | 97126 | 58114150 ~ 58136639 (+) | True | LOC100136741 |
| TU1496012 | other | downstream | 419520 | 58436544 ~ 58439078 (+) | True | LOC110490438 |
| TU1496058 | other | downstream | 460213 | 58477237 ~ 58484691 (+) | True | LOC110490440 |
| TU1496080 | other | downstream | 511890 | 58528914 ~ 58548338 (+) | True | LOC110490442 |
| TU1496123 | other | downstream | 537729 | 58554753 ~ 58563858 (+) | True | LOC110490444 |
