Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036945145.1 |
| length | 993 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 5 |
| gene id | LOC110499751 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 69881224 ~ 69891087 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0042074 | cell migration involved in gastrulation | biological_process |
| GO:0007254 | JNK cascade | biological_process |
| GO:0003007 | heart morphogenesis | biological_process |
| GO:0060027 | convergent extension involved in gastrulation | biological_process |
| GO:0016055 | Wnt signaling pathway | biological_process |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0008270 | zinc ion binding | molecular_function |
| id | description |
|---|---|
| K09377 | CSRP; cysteine and glycine-rich protein |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1509430 | lncRNA | downstream | 138 | 69880641 ~ 69881089 (-) | True | G1322338 |
| TU1509432 | lncRNA | downstream | 669 | 69879515 ~ 69880558 (-) | True | G1322340 |
| TU1509421 | lncRNA | downstream | 5335 | 69872028 ~ 69875892 (-) | True | G1322334 |
| TU1509375 | lncRNA | downstream | 76132 | 69804491 ~ 69805095 (-) | True | G1322292 |
| TU1509372 | lncRNA | downstream | 81723 | 69798289 ~ 69799504 (-) | True | G1322290 |
| TU1509440 | lncRNA | upstream | 6677 | 69897748 ~ 69899703 (-) | False | G1322348 |
| TU1509425 | lncRNA | upstream | 54570 | 69945641 ~ 69948082 (-) | False | G1322337 |
| TU1509427 | lncRNA | upstream | 54570 | 69945641 ~ 69948082 (-) | False | G1322337 |
| TU1509429 | lncRNA | upstream | 54570 | 69945641 ~ 69947251 (-) | False | G1322337 |
| TU1509426 | lncRNA | upstream | 56337 | 69947408 ~ 69990817 (-) | True | G1322337 |
| XM_036945131.1 | mRNA | downstream | 51460 | 69678178 ~ 69829767 (-) | False | LOC110500965 |
| XM_036945132.1 | mRNA | downstream | 51460 | 69678178 ~ 69829767 (-) | True | LOC110500965 |
| XM_036945130.1 | mRNA | downstream | 98686 | 69678178 ~ 69782541 (-) | False | LOC110500965 |
| XM_036945133.1 | mRNA | downstream | 98719 | 69678178 ~ 69782508 (-) | False | LOC110500965 |
| XM_036945135.1 | mRNA | downstream | 149639 | 69678178 ~ 69731588 (-) | False | LOC110500965 |
| XM_036945146.1 | mRNA | upstream | 14350 | 69905421 ~ 69927630 (-) | False | LOC110499754 |
| XM_036945147.1 | mRNA | upstream | 14350 | 69905421 ~ 69927631 (-) | True | LOC110499754 |
| LOC110490659 | mRNA | upstream | 502190 | 70393261 ~ 70394050 (-) | True | LOC110490659 |
| XM_021564126.2 | mRNA | upstream | 504660 | 70395731 ~ 70397315 (-) | True | LOC110490652 |
| XM_036945185.1 | mRNA | upstream | 652305 | 70543376 ~ 70547418 (-) | False | LOC110490645 |
| TU1509018 | other | downstream | 318187 | 69562310 ~ 69563040 (-) | True | G1321997 |
| TU1508670 | other | downstream | 658199 | 69220303 ~ 69223028 (-) | True | G1321729 |
| TU1508651 | other | downstream | 724228 | 69155526 ~ 69156999 (-) | True | LOC110490790 |
| TU1508586 | other | downstream | 807951 | 69031026 ~ 69073276 (-) | False | G1321652 |
| TU1508038 | other | downstream | 1704845 | 68072401 ~ 68176382 (-) | True | LOC110513021 |
| TU1509441 | other | upstream | 7614 | 69898685 ~ 69899703 (-) | True | G1322348 |
| TU1510302 | other | upstream | 645381 | 70536452 ~ 70537139 (-) | True | G1323036 |
| TU1510280 | other | upstream | 652285 | 70543356 ~ 70545220 (-) | True | LOC110490645 |
| TU1510499 | other | upstream | 1134180 | 71025251 ~ 71039522 (-) | True | G1323207 |
| TU1510608 | other | upstream | 1311429 | 71202500 ~ 71237846 (-) | False | G1323296 |
