Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1438585 |
| length | 293 |
| lncRNA type | intronic |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G1259235 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 12723746 ~ 12724038 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1438541 | lncRNA | downstream | 3014 | 12719005 ~ 12720732 (-) | True | G1259194 |
| TU1438536 | lncRNA | downstream | 54033 | 12667796 ~ 12669713 (-) | True | G1259190 |
| TU1438539 | lncRNA | downstream | 82236 | 12641009 ~ 12641510 (-) | False | G1259192 |
| TU1438538 | lncRNA | downstream | 82236 | 12641167 ~ 12641510 (-) | True | G1259192 |
| TU1438529 | lncRNA | downstream | 89443 | 12633603 ~ 12634303 (-) | True | G1259183 |
| TU1438588 | lncRNA | upstream | 14042 | 12738080 ~ 12738480 (-) | True | G1259238 |
| TU1438589 | lncRNA | upstream | 15094 | 12739132 ~ 12739446 (-) | True | G1259239 |
| TU1438590 | lncRNA | upstream | 16094 | 12740132 ~ 12740341 (-) | True | G1259240 |
| TU1438606 | lncRNA | upstream | 37178 | 12761216 ~ 12761440 (-) | True | G1259256 |
| TU1438931 | lncRNA | upstream | 90185 | 12814223 ~ 12918748 (-) | True | G1259529 |
| XM_021562330.2 | mRNA | downstream | 190303 | 12507315 ~ 12533443 (-) | False | LOC110489593 |
| XM_021562331.2 | mRNA | downstream | 190304 | 12507316 ~ 12533442 (-) | False | LOC110489593 |
| XM_021562328.2 | mRNA | downstream | 195964 | 12507315 ~ 12527782 (-) | False | LOC110489593 |
| XM_021562329.2 | mRNA | downstream | 195968 | 12507315 ~ 12527778 (-) | False | LOC110489593 |
| XM_036943712.1 | mRNA | downstream | 195969 | 12507315 ~ 12527777 (-) | False | LOC110489593 |
| XR_005036043.1 | mRNA | upstream | 38374 | 12762412 ~ 12769791 (-) | True | LOC110489587 |
| LOC110489601 | mRNA | upstream | 428336 | 13152374 ~ 13163864 (-) | False | LOC110489601 |
| XM_021562337.2 | mRNA | upstream | 446310 | 13170348 ~ 13176530 (-) | True | LOC110489602 |
| XR_005036302.1 | mRNA | upstream | 471687 | 13195725 ~ 13197730 (-) | False | LOC110490823 |
| XR_002468753.2 | mRNA | upstream | 471687 | 13195725 ~ 13201088 (-) | True | LOC110490823 |
| TU1438430 | other | downstream | 190358 | 12510872 ~ 12533388 (-) | False | LOC110489593 |
| TU1438431 | other | downstream | 190358 | 12511483 ~ 12533388 (-) | True | LOC110489593 |
| TU1436701 | other | downstream | 1904835 | 10818443 ~ 10818911 (-) | True | G1257642 |
| TU1435807 | other | downstream | 2427756 | 10287673 ~ 10295990 (-) | True | LOC110489570 |
| TU1435537 | other | downstream | 2849004 | 9873519 ~ 9874742 (-) | True | G1256654 |
| TU1439729 | other | upstream | 618015 | 13342053 ~ 13360778 (-) | False | LOC110489604 |
| TU1439722 | other | upstream | 618188 | 13342226 ~ 13360778 (-) | False | LOC110489604 |
| TU1439725 | other | upstream | 618378 | 13342416 ~ 13360778 (-) | False | LOC110489604 |
| TU1439823 | other | upstream | 662351 | 13386389 ~ 13387587 (-) | True | G1260199 |
| TU1439858 | other | upstream | 738827 | 13462865 ~ 13505161 (-) | True | G1260226 |
