Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1444610 |
| length | 290 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G1264335 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 17642170 ~ 17642459 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1444583 | lncRNA | downstream | 44136 | 17597735 ~ 17598034 (-) | True | G1264310 |
| TU1444571 | lncRNA | downstream | 57231 | 17584604 ~ 17584939 (-) | True | G1264298 |
| TU1444560 | lncRNA | downstream | 70036 | 17570209 ~ 17572134 (-) | True | G1264287 |
| TU1444444 | lncRNA | downstream | 90737 | 17472345 ~ 17551433 (-) | False | G1264198 |
| TU1444615 | lncRNA | upstream | 6695 | 17649154 ~ 17649356 (-) | True | G1264340 |
| TU1444686 | lncRNA | upstream | 126577 | 17769036 ~ 17769354 (-) | True | G1264408 |
| TU1444787 | lncRNA | upstream | 200271 | 17842730 ~ 17842986 (-) | True | G1264509 |
| TU1444845 | lncRNA | upstream | 244589 | 17887048 ~ 17887255 (-) | True | G1264566 |
| TU1444860 | lncRNA | upstream | 255349 | 17897808 ~ 17898040 (-) | True | G1264581 |
| XM_021562503.2 | mRNA | downstream | 114160 | 17476964 ~ 17528010 (-) | True | LOC110489717 |
| XM_021562504.2 | mRNA | downstream | 124933 | 17476964 ~ 17517237 (-) | False | LOC110489717 |
| XR_005036055.1 | mRNA | downstream | 415730 | 17207282 ~ 17226440 (-) | True | actr3b |
| XM_021562502.2 | mRNA | downstream | 415731 | 17207282 ~ 17226439 (-) | False | actr3b |
| XM_021562501.2 | mRNA | downstream | 415732 | 17207282 ~ 17226438 (-) | False | actr3b |
| XM_021562512.2 | mRNA | upstream | 19252 | 17661711 ~ 17728784 (-) | False | bcl2a |
| XM_021562510.2 | mRNA | upstream | 19252 | 17661711 ~ 17728790 (-) | False | bcl2a |
| XM_021562511.2 | mRNA | upstream | 19252 | 17661711 ~ 17728790 (-) | True | bcl2a |
| LOC110489721 | mRNA | upstream | 100190 | 17742649 ~ 17746298 (-) | True | LOC110489721 |
| XM_021562514.2 | mRNA | upstream | 108789 | 17751248 ~ 17756522 (-) | True | LOC110489722 |
| TU1444458 | other | downstream | 179193 | 17461828 ~ 17462977 (-) | True | G1264199 |
| TU1443617 | other | downstream | 995753 | 16645644 ~ 16646417 (-) | True | G1263444 |
| TU1442865 | other | downstream | 1365618 | 16276009 ~ 16276552 (-) | True | G1262745 |
| TU1442665 | other | downstream | 1607048 | 15989286 ~ 16035122 (-) | True | LOC110490929 |
| TU1442531 | other | downstream | 1797029 | 15828351 ~ 15845141 (-) | True | LOC110489690 |
| TU1445577 | other | upstream | 541332 | 18183791 ~ 18184123 (-) | True | G1265249 |
| TU1445798 | other | upstream | 934080 | 18576539 ~ 18580163 (-) | False | G1265456 |
| TU1445796 | other | upstream | 934259 | 18576718 ~ 18579791 (-) | False | G1265456 |
| TU1445799 | other | upstream | 934259 | 18576718 ~ 18580163 (-) | True | G1265456 |
| TU1446969 | other | upstream | 1466100 | 19108559 ~ 19109357 (-) | True | G1266471 |
