Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1448616 |
| length | 654 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G1267986 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 20969282 ~ 20969935 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1448590 | lncRNA | upstream | 64763 | 20904265 ~ 20904519 (+) | True | G1267965 |
| TU1448587 | lncRNA | upstream | 66575 | 20902493 ~ 20902707 (+) | True | G1267962 |
| TU1448526 | lncRNA | upstream | 164520 | 20801241 ~ 20804762 (+) | True | LOC110490942 |
| TU1448480 | lncRNA | upstream | 190784 | 20777986 ~ 20778498 (+) | True | G1267867 |
| TU1448495 | lncRNA | upstream | 228442 | 20738895 ~ 20740840 (+) | True | G1267877 |
| TU1448608 | lncRNA | downstream | 1980 | 20971915 ~ 20973334 (+) | True | slc22a17 |
| TU1448734 | lncRNA | downstream | 202027 | 21171962 ~ 21172222 (+) | True | G1268075 |
| TU1448744 | lncRNA | downstream | 285326 | 21255261 ~ 21257850 (+) | True | G1268081 |
| TU1448819 | lncRNA | downstream | 317696 | 21287631 ~ 21289238 (+) | True | G1268151 |
| TU1448855 | lncRNA | downstream | 361141 | 21331076 ~ 21331425 (+) | True | G1268178 |
| XM_021562687.2 | mRNA | upstream | 9199 | 20958415 ~ 20960083 (+) | False | cebp1 |
| XM_021562688.2 | mRNA | upstream | 9199 | 20958424 ~ 20960083 (+) | True | cebp1 |
| XM_036944046.1 | mRNA | upstream | 25593 | 20927332 ~ 20943689 (+) | False | pabpn1 |
| XM_036944045.1 | mRNA | upstream | 25933 | 20927320 ~ 20943349 (+) | False | pabpn1 |
| XM_021562689.2 | mRNA | downstream | 1869 | 20971804 ~ 20983450 (+) | False | slc22a17 |
| XM_021562690.2 | mRNA | downstream | 60722 | 21030657 ~ 21046564 (+) | True | LOC100136149 |
| XM_021562691.2 | mRNA | downstream | 85723 | 21055658 ~ 21074100 (+) | True | LOC110489782 |
| LOC110490945 | mRNA | downstream | 114455 | 21084390 ~ 21092435 (+) | True | LOC110490945 |
| XM_021562693.2 | mRNA | downstream | 137839 | 21107774 ~ 21130305 (+) | True | LOC110489785 |
| TU1448574 | other | upstream | 127884 | 20840295 ~ 20841398 (+) | True | G1267949 |
| TU1446540 | other | upstream | 1289177 | 19674113 ~ 19680105 (+) | True | epb41l3a |
| TU1446004 | other | upstream | 2106771 | 18860111 ~ 18862511 (+) | True | LOC110489737 |
| TU1442095 | other | upstream | 5075118 | 15892968 ~ 15894164 (+) | False | mcmdc2 |
| TU1441984 | other | upstream | 5232865 | 15735930 ~ 15736417 (+) | True | G1261980 |
| TU1449889 | other | downstream | 816286 | 21786221 ~ 21794253 (+) | False | slc12a7b |
| TU1451171 | other | downstream | 2162924 | 23132859 ~ 23136721 (+) | True | LOC110489812 |
| TU1451615 | other | downstream | 2407373 | 23377308 ~ 23377560 (+) | True | G1270643 |
| TU1451627 | other | downstream | 2436725 | 23406660 ~ 23408002 (+) | True | G1270652 |
| TU1451648 | other | downstream | 2475903 | 23445838 ~ 23450473 (+) | True | G1270669 |
