RNA id: TU1449792


Basic Information

Item Value
RNA id TU1449792
length 210
lncRNA type intronic
GC content 0.35
exon number 1
gene id G1268998
representative True

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 21600686 ~ 21600895 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaataatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggttgcaaagttcaagggggccgaatactttcgcaaggcactgtag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1449759 lncRNA downstream 46386 21554055 ~ 21554300 (-) True G1268966
TU1449757 lncRNA downstream 47736 21552644 ~ 21552950 (-) True G1268964
TU1449526 lncRNA downstream 202266 21314995 ~ 21398420 (-) True G1268745
TU1449580 lncRNA downstream 216842 21383356 ~ 21383844 (-) True G1268793
TU1449507 lncRNA downstream 304297 21255263 ~ 21296389 (-) False LOC110489787
TU1450015 lncRNA upstream 23925 21624820 ~ 21626499 (-) True G1269176
TU1450033 lncRNA upstream 88892 21689787 ~ 21691301 (-) True G1269191
TU1450035 lncRNA upstream 90919 21691814 ~ 21692198 (-) True G1269193
TU1450108 lncRNA upstream 175658 21776553 ~ 21777910 (-) True G1269252
TU1450112 lncRNA upstream 185627 21786522 ~ 21788838 (-) True G1269256
XM_036944051.1 mRNA downstream 303960 21174593 ~ 21296726 (-) False LOC110489787
XM_036945611.1 mRNA upstream 16524 21617419 ~ 21680364 (-) True scospondin
XM_021562714.2 mRNA upstream 252805 21853700 ~ 21864112 (-) False LOC110489796
XM_036944058.1 mRNA upstream 252805 21853700 ~ 21864113 (-) False LOC110489796
XM_036944059.1 mRNA upstream 252805 21853700 ~ 21864113 (-) True LOC110489796
XM_021562725.2 mRNA upstream 614576 22215471 ~ 22297843 (-) False LOC110489804
TU1449275 other downstream 640597 20958372 ~ 20960089 (-) True G1268555
TU1448043 other downstream 1310013 20290350 ~ 20290673 (-) True G1267452
TU1448004 other downstream 1332198 20267966 ~ 20268488 (-) True G1267414
TU1447224 other downstream 2146916 19435018 ~ 19453770 (-) True G1266708
TU1446969 other downstream 2491329 19108559 ~ 19109357 (-) True G1266471
TU1450121 other upstream 201792 21802687 ~ 21803352 (-) True G1269265
TU1452449 other upstream 2112460 23713355 ~ 23717459 (-) False G1271421
TU1452450 other upstream 2112460 23713355 ~ 23717459 (-) False G1271421
TU1452453 other upstream 2112460 23713355 ~ 23728939 (-) False G1271421
TU1452454 other upstream 2112460 23713355 ~ 23728939 (-) True G1271421

Expression Profile