Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1459008 |
| length | 485 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 2 |
| gene id | G1277478 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 28750691 ~ 28751365 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
28,749,200
28,749,600
28,750,000
28,750,400
28,750,800
28,751,200
28,751,600
28,751,600
28,752,000
28,752,400
28,752,800
28,753,200
28,753,600
28,754,000
28,754,400
NC_048579.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1459087 | lncRNA | downstream | 4213 | 28745766 ~ 28746478 (-) | True | G1277553 |
| TU1459085 | lncRNA | downstream | 6443 | 28743915 ~ 28744248 (-) | True | G1277552 |
| TU1459072 | lncRNA | downstream | 20004 | 28730360 ~ 28730687 (-) | True | G1277539 |
| TU1458994 | lncRNA | downstream | 33043 | 28623691 ~ 28717648 (-) | True | G1277467 |
| TU1458945 | lncRNA | downstream | 214523 | 28535873 ~ 28536168 (-) | True | G1277425 |
| TU1459096 | lncRNA | upstream | 17337 | 28768702 ~ 28811015 (-) | True | G1277556 |
| TU1459090 | lncRNA | upstream | 25057 | 28776422 ~ 28812062 (-) | True | G1277554 |
| TU1459143 | lncRNA | upstream | 71321 | 28822686 ~ 28822893 (-) | True | G1277590 |
| TU1459145 | lncRNA | upstream | 74453 | 28825818 ~ 28826048 (-) | True | G1277592 |
| TU1459106 | lncRNA | upstream | 88903 | 28840268 ~ 28911845 (-) | True | G1277558 |
| XM_021562977.2 | mRNA | downstream | 26566 | 28701177 ~ 28724125 (-) | False | LOC110489947 |
| XM_021562974.2 | mRNA | downstream | 118171 | 28619838 ~ 28632520 (-) | True | LOC110489945 |
| XM_021562975.2 | mRNA | downstream | 130940 | 28616467 ~ 28619751 (-) | True | tyms |
| XM_021562968.2 | mRNA | downstream | 185150 | 28559194 ~ 28565541 (-) | False | adcyap1a |
| XM_036945531.1 | mRNA | upstream | 66474 | 28817839 ~ 28818590 (-) | True | LOC118938886 |
| XM_036944251.1 | mRNA | upstream | 216066 | 28967431 ~ 28976889 (-) | False | nsun6 |
| XM_036944245.1 | mRNA | upstream | 216066 | 28967431 ~ 28976894 (-) | False | nsun6 |
| XM_036944249.1 | mRNA | upstream | 216066 | 28967431 ~ 28976895 (-) | False | nsun6 |
| XM_036944247.1 | mRNA | upstream | 216066 | 28967431 ~ 28976896 (-) | False | nsun6 |
| TU1459005 | other | downstream | 47138 | 28701202 ~ 28703553 (-) | True | LOC110489947 |
| TU1458959 | other | downstream | 185178 | 28559311 ~ 28565513 (-) | True | adcyap1a |
| TU1458397 | other | downstream | 484936 | 28261540 ~ 28265755 (-) | True | G1276905 |
| TU1458103 | other | downstream | 659850 | 28090494 ~ 28090841 (-) | True | G1276639 |
| TU1458029 | other | downstream | 791257 | 27959052 ~ 27959434 (-) | True | G1276566 |
| TU1460464 | other | upstream | 879660 | 29631025 ~ 29631768 (-) | True | G1278860 |
| TU1460659 | other | upstream | 1227810 | 29979175 ~ 29988516 (-) | False | dlgap1b |
| TU1463174 | other | upstream | 3112869 | 31864234 ~ 31864636 (-) | True | G1281361 |
| TU1463176 | other | upstream | 3113924 | 31865289 ~ 31866137 (-) | True | G1281363 |
| TU1464009 | other | upstream | 3724554 | 32475919 ~ 32478516 (-) | False | G1282159 |
