Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1458802 |
| length | 235 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G1277284 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 28822367 ~ 28822601 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1458801 | lncRNA | upstream | 106 | 28821923 ~ 28822261 (+) | True | G1277283 |
| TU1458799 | lncRNA | upstream | 3355 | 28818717 ~ 28819012 (+) | True | G1277281 |
| TU1458795 | lncRNA | upstream | 8984 | 28813183 ~ 28813383 (+) | True | G1277277 |
| TU1458794 | lncRNA | upstream | 9618 | 28812175 ~ 28812749 (+) | True | G1277276 |
| TU1458692 | lncRNA | upstream | 119259 | 28701203 ~ 28703108 (+) | True | G1277186 |
| TU1458726 | lncRNA | downstream | 100965 | 28923566 ~ 28966144 (+) | True | G1277212 |
| TU1458915 | lncRNA | downstream | 192702 | 29015303 ~ 29015534 (+) | True | G1277396 |
| TU1458916 | lncRNA | downstream | 193136 | 29015737 ~ 29015958 (+) | True | G1277397 |
| TU1458919 | lncRNA | downstream | 195641 | 29018242 ~ 29018608 (+) | True | G1277400 |
| TU1458927 | lncRNA | downstream | 204475 | 29027076 ~ 29027307 (+) | True | G1277408 |
| XM_021562981.2 | mRNA | upstream | 10305 | 28795080 ~ 28812062 (+) | False | LOC110489949 |
| XM_036944237.1 | mRNA | upstream | 10305 | 28795080 ~ 28812062 (+) | True | LOC110489949 |
| XM_021562980.2 | mRNA | upstream | 45278 | 28756788 ~ 28777089 (+) | True | LOC110489948 |
| XM_021564278.2 | mRNA | upstream | 80891 | 28731076 ~ 28741476 (+) | True | LOC110490831 |
| XM_036944235.1 | mRNA | upstream | 123411 | 28642207 ~ 28698956 (+) | True | LOC100136716 |
| XM_021562982.2 | mRNA | downstream | 3979 | 28826580 ~ 28837296 (+) | False | LOC110489950 |
| XM_021562983.2 | mRNA | downstream | 3979 | 28826580 ~ 28837296 (+) | False | LOC110489950 |
| XM_036944238.1 | mRNA | downstream | 10461 | 28833062 ~ 28837296 (+) | True | LOC110489950 |
| XM_036944239.1 | mRNA | downstream | 28560 | 28851161 ~ 28963361 (+) | False | cacnb2a |
| XM_036944241.1 | mRNA | downstream | 28560 | 28851161 ~ 28963361 (+) | False | cacnb2a |
| TU1458797 | other | upstream | 6557 | 28815366 ~ 28815810 (+) | True | G1277279 |
| TU1458658 | other | upstream | 198149 | 28574316 ~ 28624218 (+) | False | G1277159 |
| TU1458659 | other | upstream | 198149 | 28574316 ~ 28624218 (+) | True | G1277159 |
| TU1458201 | other | upstream | 565961 | 28190186 ~ 28256406 (+) | True | G1276733 |
| TU1457707 | other | upstream | 968354 | 27853618 ~ 27854013 (+) | True | G1276288 |
| TU1460985 | other | downstream | 1480432 | 30303033 ~ 30303419 (+) | True | G1279349 |
| TU1461105 | other | downstream | 1573266 | 30395867 ~ 30408017 (+) | False | htr5ab |
| TU1461526 | other | downstream | 2121570 | 30944171 ~ 30947330 (+) | True | G1279833 |
| TU1463280 | other | downstream | 3173566 | 31996167 ~ 31996513 (+) | True | G1281462 |
| TU1464164 | other | downstream | 3864957 | 32687558 ~ 32698036 (+) | False | G1282302 |
