Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1459487 |
| length | 259 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G1277920 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 29195825 ~ 29196083 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1459484 | lncRNA | upstream | 1296 | 29194320 ~ 29194529 (+) | True | G1277917 |
| TU1459359 | lncRNA | upstream | 56513 | 29138385 ~ 29139312 (+) | True | G1277793 |
| TU1459327 | lncRNA | upstream | 109647 | 29085393 ~ 29086178 (+) | True | G1277761 |
| TU1459316 | lncRNA | upstream | 129326 | 29066275 ~ 29066499 (+) | True | G1277751 |
| TU1459311 | lncRNA | upstream | 135695 | 29059865 ~ 29060130 (+) | True | G1277746 |
| TU1459565 | lncRNA | downstream | 101480 | 29297563 ~ 29310123 (+) | False | G1277993 |
| TU1459567 | lncRNA | downstream | 101480 | 29297563 ~ 29310123 (+) | True | G1277993 |
| TU1459503 | lncRNA | downstream | 185333 | 29381416 ~ 29383509 (+) | True | plxdc2 |
| TU1459694 | lncRNA | downstream | 310018 | 29506101 ~ 29506490 (+) | True | G1278114 |
| TU1459695 | lncRNA | downstream | 310569 | 29506652 ~ 29506857 (+) | True | G1278115 |
| XM_036944252.1 | mRNA | upstream | 14623 | 29070354 ~ 29181202 (+) | True | malrd1 |
| XR_005036078.1 | mRNA | upstream | 16414 | 29070354 ~ 29179411 (+) | False | malrd1 |
| XM_021562987.2 | mRNA | upstream | 199503 | 28983479 ~ 28996322 (+) | False | arl8 |
| XM_021562988.2 | mRNA | upstream | 199503 | 28983479 ~ 28996322 (+) | True | arl8 |
| XM_036944240.1 | mRNA | upstream | 232464 | 28911485 ~ 28963361 (+) | True | cacnb2a |
| XM_021562992.2 | mRNA | downstream | 11177 | 29207260 ~ 29383520 (+) | False | plxdc2 |
| XM_021562995.2 | mRNA | downstream | 209213 | 29405296 ~ 29415105 (+) | False | zfand1 |
| XM_036944253.1 | mRNA | downstream | 209258 | 29405341 ~ 29415105 (+) | False | zfand1 |
| XM_021562996.2 | mRNA | downstream | 209794 | 29405877 ~ 29415105 (+) | True | zfand1 |
| XM_021563002.2 | mRNA | downstream | 226311 | 29422394 ~ 29426818 (+) | True | prlh2 |
| TU1458797 | other | upstream | 380015 | 28815366 ~ 28815810 (+) | True | G1277279 |
| TU1458658 | other | upstream | 571607 | 28574316 ~ 28624218 (+) | False | G1277159 |
| TU1458659 | other | upstream | 571607 | 28574316 ~ 28624218 (+) | True | G1277159 |
| TU1458201 | other | upstream | 939419 | 28190186 ~ 28256406 (+) | True | G1276733 |
| TU1457707 | other | upstream | 1341812 | 27853618 ~ 27854013 (+) | True | G1276288 |
| TU1460985 | other | downstream | 1106950 | 30303033 ~ 30303419 (+) | True | G1279349 |
| TU1461105 | other | downstream | 1199784 | 30395867 ~ 30408017 (+) | False | htr5ab |
| TU1461526 | other | downstream | 1748088 | 30944171 ~ 30947330 (+) | True | G1279833 |
| TU1463280 | other | downstream | 2800084 | 31996167 ~ 31996513 (+) | True | G1281462 |
| TU1464164 | other | downstream | 3491475 | 32687558 ~ 32698036 (+) | False | G1282302 |
