Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1460109 |
| length | 285 |
| lncRNA type | intronic |
| GC content | 0.57 |
| exon number | 2 |
| gene id | G1278514 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 30112319 ~ 30114236 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1460060 | lncRNA | upstream | 42326 | 30056501 ~ 30069993 (+) | True | G1278468 |
| TU1460064 | lncRNA | upstream | 52350 | 30059551 ~ 30059969 (+) | True | G1278471 |
| TU1459959 | lncRNA | upstream | 131024 | 29939096 ~ 29981295 (+) | True | G1278372 |
| TU1459958 | lncRNA | upstream | 133216 | 29977331 ~ 29979103 (+) | True | G1278371 |
| TU1459990 | lncRNA | upstream | 146654 | 29948758 ~ 29965665 (+) | True | G1278401 |
| TU1460984 | lncRNA | downstream | 188436 | 30302672 ~ 30302880 (+) | True | G1279348 |
| TU1461020 | lncRNA | downstream | 236256 | 30350492 ~ 30352896 (+) | True | G1279379 |
| TU1461036 | lncRNA | downstream | 259791 | 30374027 ~ 30374269 (+) | True | G1279395 |
| TU1461045 | lncRNA | downstream | 272641 | 30386877 ~ 30387089 (+) | True | G1279404 |
| TU1461102 | lncRNA | downstream | 280977 | 30395213 ~ 30395447 (+) | True | G1279449 |
| XM_021563014.2 | mRNA | upstream | 136233 | 29969944 ~ 29976086 (+) | True | tgif1 |
| XM_021563008.2 | mRNA | upstream | 416368 | 29689717 ~ 29695951 (+) | True | LOC110489968 |
| XM_021563004.2 | mRNA | upstream | 447398 | 29657968 ~ 29664921 (+) | True | ackr4b |
| XM_021563001.2 | mRNA | upstream | 479500 | 29604655 ~ 29632819 (+) | False | si:dkey-12l12.1 |
| XM_021563017.2 | mRNA | downstream | 215574 | 30329810 ~ 30345566 (+) | False | LOC110489977 |
| XM_021563018.2 | mRNA | downstream | 215574 | 30329810 ~ 30345566 (+) | True | LOC110489977 |
| XM_021563020.2 | mRNA | downstream | 281581 | 30395817 ~ 30416375 (+) | False | htr5ab |
| XM_021563021.2 | mRNA | downstream | 281581 | 30395817 ~ 30416375 (+) | False | htr5ab |
| XM_021563023.2 | mRNA | downstream | 367781 | 30482017 ~ 30496207 (+) | True | insig1 |
| TU1458797 | other | upstream | 1296509 | 28815366 ~ 28815810 (+) | True | G1277279 |
| TU1458658 | other | upstream | 1488101 | 28574316 ~ 28624218 (+) | False | G1277159 |
| TU1458659 | other | upstream | 1488101 | 28574316 ~ 28624218 (+) | True | G1277159 |
| TU1458201 | other | upstream | 1855913 | 28190186 ~ 28256406 (+) | True | G1276733 |
| TU1457707 | other | upstream | 2258306 | 27853618 ~ 27854013 (+) | True | G1276288 |
| TU1460985 | other | downstream | 188797 | 30303033 ~ 30303419 (+) | True | G1279349 |
| TU1461105 | other | downstream | 281631 | 30395867 ~ 30408017 (+) | False | htr5ab |
| TU1461526 | other | downstream | 829935 | 30944171 ~ 30947330 (+) | True | G1279833 |
| TU1463280 | other | downstream | 1881931 | 31996167 ~ 31996513 (+) | True | G1281462 |
| TU1464164 | other | downstream | 2573322 | 32687558 ~ 32698036 (+) | False | G1282302 |
